Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Gm4917-201ENSMUST00000121452 650 ntBASIC13.25□□□□□ -0.29
Alx1Q8C8B0 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Alx1Q8C8B0 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Gm6407-201ENSMUST00000176468 549 ntBASIC13.24□□□□□ -0.29
Alx1Q8C8B0 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.24□□□□□ -0.29
Alx1Q8C8B0 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Gm43380-201ENSMUST00000200421 220 ntBASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 AC136376.2-201ENSMUST00000228819 490 ntBASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Gm43482-201ENSMUST00000202797 1861 ntBASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Alx1Q8C8B0 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC13.24□□□□□ -0.29
Alx1Q8C8B0 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Gm5822-201ENSMUST00000161562 1378 ntBASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Gm5739-201ENSMUST00000208601 1703 ntBASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Gm13937-201ENSMUST00000121000 988 ntBASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Gm45594-201ENSMUST00000211717 241 ntBASIC13.23□□□□□ -0.29
Alx1Q8C8B0 AC153152.3-201ENSMUST00000222188 1135 ntBASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Id2-203ENSMUST00000222667 958 ntBASIC13.23□□□□□ -0.29
Alx1Q8C8B0 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Alx1Q8C8B0 Mirlet7i-201ENSMUST00000083472 85 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms