Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cps1Q8C196 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.07■□□□□ 0
Cps1Q8C196 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cps1Q8C196 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cps1Q8C196 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC15.07■□□□□ 0
Cps1Q8C196 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Cps1Q8C196 Mir744-201ENSMUST00000103261 100 ntBASIC15.07■□□□□ 0
Cps1Q8C196 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC15.07■□□□□ 0
Cps1Q8C196 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cps1Q8C196 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC15.07■□□□□ 0
Cps1Q8C196 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Cps1Q8C196 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC15.07■□□□□ 0
Cps1Q8C196 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cps1Q8C196 Gm29304-201ENSMUST00000186555 695 ntBASIC15.07■□□□□ 0
Cps1Q8C196 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC15.07■□□□□ 0
Cps1Q8C196 Gm29223-201ENSMUST00000188867 695 ntBASIC15.07■□□□□ 0
Cps1Q8C196 Gm37921-201ENSMUST00000194333 695 ntBASIC15.07■□□□□ 0
Cps1Q8C196 Gm29808-201ENSMUST00000194419 468 ntBASIC15.07■□□□□ 0
Cps1Q8C196 Gm9409-201ENSMUST00000197017 316 ntBASIC15.07■□□□□ 0
Cps1Q8C196 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cps1Q8C196 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC15.07■□□□□ 0
Cps1Q8C196 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cps1Q8C196 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cps1Q8C196 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC15.07■□□□□ 0
Cps1Q8C196 AC187103.3-201ENSMUST00000225725 646 ntBASIC15.07■□□□□ 0
Cps1Q8C196 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cps1Q8C196 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cps1Q8C196 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC15.07■□□□□ 0
Cps1Q8C196 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cps1Q8C196 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cps1Q8C196 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cps1Q8C196 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Cps1Q8C196 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cps1Q8C196 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cps1Q8C196 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cps1Q8C196 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cps1Q8C196 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cps1Q8C196 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cps1Q8C196 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cps1Q8C196 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cps1Q8C196 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC15.06■□□□□ 0
Cps1Q8C196 Gm15258-201ENSMUST00000153801 741 ntBASIC15.06■□□□□ 0
Cps1Q8C196 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cps1Q8C196 Gm6216-201ENSMUST00000182390 687 ntBASIC15.06■□□□□ 0
Cps1Q8C196 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cps1Q8C196 AC160929.1-201ENSMUST00000221247 415 ntBASIC15.06■□□□□ 0
Cps1Q8C196 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cps1Q8C196 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cps1Q8C196 Gm12716-201ENSMUST00000120606 1354 ntBASIC15.06■□□□□ 0
Cps1Q8C196 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC15.06■□□□□ 0
Cps1Q8C196 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cps1Q8C196 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cps1Q8C196 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC15.05■□□□□ 0
Cps1Q8C196 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Cps1Q8C196 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cps1Q8C196 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Cps1Q8C196 Gm29245-201ENSMUST00000187332 1416 ntBASIC15.05■□□□□ -0
Cps1Q8C196 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC15.05■□□□□ -0
Cps1Q8C196 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cps1Q8C196 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Cps1Q8C196 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cps1Q8C196 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.05■□□□□ -0
Cps1Q8C196 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Cps1Q8C196 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cps1Q8C196 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC15.05■□□□□ -0
Cps1Q8C196 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cps1Q8C196 Gm11736-201ENSMUST00000121468 505 ntBASIC15.05■□□□□ -0
Cps1Q8C196 Gm14148-201ENSMUST00000122433 1008 ntBASIC15.05■□□□□ -0
Cps1Q8C196 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC15.05■□□□□ -0
Cps1Q8C196 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cps1Q8C196 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cps1Q8C196 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Cps1Q8C196 Gm43097-201ENSMUST00000196867 151 ntBASIC15.05■□□□□ -0
Cps1Q8C196 Gm5738-201ENSMUST00000206016 779 ntBASIC15.05■□□□□ -0
Cps1Q8C196 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC15.05■□□□□ -0
Cps1Q8C196 AC134537.1-201ENSMUST00000219205 265 ntBASIC15.05■□□□□ -0
Cps1Q8C196 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC15.05■□□□□ -0
Cps1Q8C196 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cps1Q8C196 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cps1Q8C196 AC134860.2-201ENSMUST00000225277 1036 ntBASIC15.05■□□□□ -0
Cps1Q8C196 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cps1Q8C196 Gm5278-201ENSMUST00000055957 552 ntBASIC15.05■□□□□ -0
Cps1Q8C196 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Cps1Q8C196 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cps1Q8C196 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cps1Q8C196 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cps1Q8C196 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cps1Q8C196 Gm7964-201ENSMUST00000051522 1378 ntBASIC15.05■□□□□ -0
Cps1Q8C196 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.05■□□□□ -0
Cps1Q8C196 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cps1Q8C196 Gm6560-201ENSMUST00000198588 1591 ntBASIC15.05■□□□□ -0
Cps1Q8C196 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cps1Q8C196 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC15.05■□□□□ -0
Cps1Q8C196 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cps1Q8C196 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cps1Q8C196 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cps1Q8C196 Paupar-201ENSMUST00000194826 3482 ntBASIC15.04■□□□□ -0
Cps1Q8C196 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cps1Q8C196 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cps1Q8C196 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms