Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Gm14381-201ENSMUST00000122105 414 ntBASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Gm27627-201ENSMUST00000183644 150 ntBASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Gm43758-201ENSMUST00000199500 367 ntBASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Gm6439-201ENSMUST00000199849 862 ntBASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Gm44967-201ENSMUST00000207047 631 ntBASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Gm13097-201ENSMUST00000210722 397 ntBASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chmp2bQ8BJF9 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Gm20482-202ENSMUST00000174729 825 ntBASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Chmp2bQ8BJF9 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms