Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Gm12380-201ENSMUST00000119012 544 ntBASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Gm43002-201ENSMUST00000200310 155 ntBASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Gm807-202ENSMUST00000224929 408 ntBASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc40Q8BI79 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
Ccdc40Q8BI79 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc40Q8BI79 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
Ccdc40Q8BI79 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc40Q8BI79 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.96□□□□□ -0.5
Ccdc40Q8BI79 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Ccdc40Q8BI79 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Ccdc40Q8BI79 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc40Q8BI79 Gm21039-201ENSMUST00000223359 2012 ntBASIC11.96□□□□□ -0.5
Ccdc40Q8BI79 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc40Q8BI79 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc40Q8BI79 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc40Q8BI79 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc40Q8BI79 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc40Q8BI79 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc40Q8BI79 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc40Q8BI79 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc40Q8BI79 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Gm23596-201ENSMUST00000104304 132 ntBASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Mir877-201ENSMUST00000104738 85 ntBASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Gm15207-201ENSMUST00000119259 442 ntBASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Gm26047-201ENSMUST00000157308 113 ntBASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Gm3332-201ENSMUST00000189337 928 ntBASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Gm26047-202ENSMUST00000198840 115 ntBASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Gm18730-201ENSMUST00000218038 343 ntBASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Gm8385-201ENSMUST00000058999 643 ntBASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ccdc40Q8BI79 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ccdc40Q8BI79 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms