Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh19Q80TF3 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Gm4294-201ENSMUST00000105169 614 ntBASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Gm20495-201ENSMUST00000173902 235 ntBASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Mir6998-201ENSMUST00000183343 64 ntBASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Gm28975-201ENSMUST00000186412 686 ntBASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Gm5244-202ENSMUST00000189517 743 ntBASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Gm42657-201ENSMUST00000201746 211 ntBASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Gm6722-201ENSMUST00000221586 390 ntBASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Gm5468-202ENSMUST00000227851 682 ntBASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pcdh19Q80TF3 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Gm12795-201ENSMUST00000117594 539 ntBASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Gm37826-201ENSMUST00000195329 322 ntBASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Gm44008-201ENSMUST00000204345 412 ntBASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Gm19009-201ENSMUST00000223072 823 ntBASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 AC132901.1-201ENSMUST00000224345 508 ntBASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 AC106830.1-201ENSMUST00000228032 1003 ntBASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 AC107452.3-201ENSMUST00000228807 1308 ntBASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Gm14667-201ENSMUST00000119448 1350 ntBASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh19Q80TF3 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms