Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Scaf4Q6PFF0 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Gm11509-201ENSMUST00000117358 325 ntBASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Gm6621-201ENSMUST00000193251 772 ntBASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Gm18935-201ENSMUST00000212692 664 ntBASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Scaf4Q6PFF0 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Scaf4Q6PFF0 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Scaf4Q6PFF0 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Scaf4Q6PFF0 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Scaf4Q6PFF0 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Scaf4Q6PFF0 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Scaf4Q6PFF0 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.21□□□□□ -0.62
Scaf4Q6PFF0 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Scaf4Q6PFF0 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Scaf4Q6PFF0 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Scaf4Q6PFF0 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.62
Scaf4Q6PFF0 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms