Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Smarcc2Q6PDG5 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 AC154404.1-201ENSMUST00000223601 2077 ntBASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 AC153380.1-201ENSMUST00000214959 2364 ntBASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Gm19178-201ENSMUST00000217524 1819 ntBASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Gm14193-201ENSMUST00000105067 153 ntBASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Gm15374-201ENSMUST00000119313 844 ntBASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Gm9540-201ENSMUST00000188230 478 ntBASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Gm6108-201ENSMUST00000208365 367 ntBASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Gm15991-202ENSMUST00000212123 3565 ntBASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Smarcc2Q6PDG5 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Gm4726-201ENSMUST00000135604 736 ntBASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Gm6019-201ENSMUST00000148369 736 ntBASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Gm3150-201ENSMUST00000166418 204 ntBASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Smarcc2Q6PDG5 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms