Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
NipblQ6KCD5 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
NipblQ6KCD5 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC8.69□□□□□ -1.02
NipblQ6KCD5 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
NipblQ6KCD5 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
NipblQ6KCD5 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
NipblQ6KCD5 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
NipblQ6KCD5 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC8.69□□□□□ -1.02
NipblQ6KCD5 Gm43811-201ENSMUST00000202862 695 ntBASIC8.69□□□□□ -1.02
NipblQ6KCD5 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
NipblQ6KCD5 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
NipblQ6KCD5 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
NipblQ6KCD5 n-R5s71-201ENSMUST00000093668 119 ntBASIC8.69□□□□□ -1.02
NipblQ6KCD5 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
NipblQ6KCD5 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
NipblQ6KCD5 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
NipblQ6KCD5 Smok4a-201ENSMUST00000074512 1455 ntBASIC8.69□□□□□ -1.02
NipblQ6KCD5 Gm5740-201ENSMUST00000211003 1857 ntBASIC8.69□□□□□ -1.02
NipblQ6KCD5 Gm38348-201ENSMUST00000191718 2273 ntBASIC8.69□□□□□ -1.02
NipblQ6KCD5 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
NipblQ6KCD5 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Gm15528-201ENSMUST00000117821 864 ntBASIC8.68□□□□□ -1.02
NipblQ6KCD5 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Gm11960-201ENSMUST00000122068 925 ntBASIC8.68□□□□□ -1.02
NipblQ6KCD5 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC8.68□□□□□ -1.02
NipblQ6KCD5 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC8.68□□□□□ -1.02
NipblQ6KCD5 D730045A05Rik-201ENSMUST00000159260 1269 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Gm17782-201ENSMUST00000174345 880 ntBASIC8.68□□□□□ -1.02
NipblQ6KCD5 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Gm37284-201ENSMUST00000193607 539 ntBASIC8.68□□□□□ -1.02
NipblQ6KCD5 Gm42617-201ENSMUST00000197640 1229 ntBASIC8.68□□□□□ -1.02
NipblQ6KCD5 Gm18010-201ENSMUST00000203553 202 ntBASIC8.68□□□□□ -1.02
NipblQ6KCD5 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC8.68□□□□□ -1.02
NipblQ6KCD5 AC107711.4-201ENSMUST00000228948 440 ntBASIC8.68□□□□□ -1.02
NipblQ6KCD5 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC8.68□□□□□ -1.02
NipblQ6KCD5 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Gm7765-201ENSMUST00000182585 974 ntBASIC8.68□□□□□ -1.02
NipblQ6KCD5 Gm43117-201ENSMUST00000198531 379 ntBASIC8.68□□□□□ -1.02
NipblQ6KCD5 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Gm9102-201ENSMUST00000219250 465 ntBASIC8.68□□□□□ -1.02
NipblQ6KCD5 Id2-203ENSMUST00000222667 958 ntBASIC8.68□□□□□ -1.02
NipblQ6KCD5 AC164978.2-201ENSMUST00000226645 857 ntBASIC8.68□□□□□ -1.02
NipblQ6KCD5 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC8.68□□□□□ -1.02
NipblQ6KCD5 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
NipblQ6KCD5 Mir453-201ENSMUST00000104732 82 ntBASIC8.67□□□□□ -1.02
NipblQ6KCD5 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Gm8255-201ENSMUST00000218693 305 ntBASIC8.67□□□□□ -1.02
NipblQ6KCD5 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Gm18621-201ENSMUST00000222677 679 ntBASIC8.67□□□□□ -1.02
NipblQ6KCD5 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Gm4778-201ENSMUST00000098878 1098 ntBASIC8.67□□□□□ -1.02
NipblQ6KCD5 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
NipblQ6KCD5 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms