Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm11803-201ENSMUST00000119966 444 ntBASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Gm8810-201ENSMUST00000172895 754 ntBASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Gm45930-201ENSMUST00000221330 292 ntBASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Gm5626-201ENSMUST00000222151 1058 ntBASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Gm44888-201ENSMUST00000209119 2541 ntBASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Man1b1-201ENSMUST00000042390 3755 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Gm8522-201ENSMUST00000118416 1929 ntBASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Klhl7-202ENSMUST00000163409 2857 ntTSL 2 BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Gm4810-201ENSMUST00000177721 1607 ntBASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Gm5912-201ENSMUST00000122282 1438 ntBASIC8.54□□□□□ -1.04
Trav3-3Q5R1C3 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Gm9220-201ENSMUST00000190721 2544 ntBASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Gm43014-201ENSMUST00000198568 2443 ntBASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Gm26724-201ENSMUST00000180434 1650 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Hemgn-201ENSMUST00000071096 2321 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Gm26927-201ENSMUST00000182385 965 ntBASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Gm45384-201ENSMUST00000210451 277 ntBASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Gm10254-201ENSMUST00000052888 867 ntBASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Gm6180-201ENSMUST00000065243 498 ntBASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Gm10146-201ENSMUST00000072739 309 ntBASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Gm44914-201ENSMUST00000207191 2720 ntBASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Tnip1-205ENSMUST00000108886 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Pik3c3-201ENSMUST00000091978 2998 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Cd160-203ENSMUST00000165991 2458 ntAPPRIS ALT2 TSL 3 BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 AC154537.1-201ENSMUST00000226101 1304 ntBASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Gin1-203ENSMUST00000112844 2046 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav3-3Q5R1C3 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Trav3-3Q5R1C3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC8.52□□□□□ -1.04
Trav3-3Q5R1C3 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Trav3-3Q5R1C3 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Trav3-3Q5R1C3 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms