Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Gm26461-201ENSMUST00000175064 290 ntBASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Gm27530-201ENSMUST00000184096 98 ntBASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Gm29499-201ENSMUST00000189151 486 ntBASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Gm28329-201ENSMUST00000191208 689 ntBASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Gm29171-201ENSMUST00000191397 486 ntBASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Gm43138-201ENSMUST00000199123 708 ntBASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.12□□□□□ -0.47
Syne3Q4FZC9 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Syne3Q4FZC9 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.11□□□□□ -0.47
Syne3Q4FZC9 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Mir5132-201ENSMUST00000175166 71 ntBASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Gm6108-201ENSMUST00000208365 367 ntBASIC12.11□□□□□ -0.47
Syne3Q4FZC9 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.11□□□□□ -0.47
Syne3Q4FZC9 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Syne3Q4FZC9 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Gm23251-201ENSMUST00000103773 110 ntBASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Gm15566-201ENSMUST00000121130 590 ntBASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Syne3Q4FZC9 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms