Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Gm37160-201ENSMUST00000193081 1689 ntBASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Gm11919-201ENSMUST00000117609 721 ntBASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Gm27826-201ENSMUST00000175282 255 ntBASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Mir6359-201ENSMUST00000183668 81 ntBASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Arhgef40Q3UPH7 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 Gm43174-201ENSMUST00000195914 2445 ntBASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 Gm43727-201ENSMUST00000198021 2647 ntBASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 CT010480.4-201ENSMUST00000224654 2283 ntBASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 Gm8659-201ENSMUST00000120024 1084 ntBASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 Gm12136-201ENSMUST00000120460 1209 ntBASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 Gm26313-201ENSMUST00000157770 308 ntBASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 AC174797.2-201ENSMUST00000225835 165 ntBASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 AC121567.1-201ENSMUST00000227213 842 ntBASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Arhgef40Q3UPH7 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Gm42480-201ENSMUST00000198434 2595 ntBASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Gm42689-201ENSMUST00000202403 404 ntBASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Gm43997-201ENSMUST00000203986 1005 ntBASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Arhgef40Q3UPH7 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Arhgef40Q3UPH7 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Arhgef40Q3UPH7 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Arhgef40Q3UPH7 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Arhgef40Q3UPH7 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Arhgef40Q3UPH7 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Arhgef40Q3UPH7 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Arhgef40Q3UPH7 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC16.47■□□□□ 0.23
Arhgef40Q3UPH7 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Arhgef40Q3UPH7 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Arhgef40Q3UPH7 Gm13192-201ENSMUST00000101199 208 ntBASIC16.47■□□□□ 0.23
Arhgef40Q3UPH7 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms