Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 AC154171.2-201ENSMUST00000225219 2652 ntBASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.1□□□□□ -0.47
Trim43aQ3TL54 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Gm4310-201ENSMUST00000177847 889 ntBASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 AA914427-201ENSMUST00000193194 1166 ntBASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Gm7940-201ENSMUST00000218195 769 ntBASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.09□□□□□ -0.47
Trim43aQ3TL54 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.09□□□□□ -0.47
Trim43aQ3TL54 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.09□□□□□ -0.47
Trim43aQ3TL54 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43aQ3TL54 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trim43aQ3TL54 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trim43aQ3TL54 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trim43aQ3TL54 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Gm26361-201ENSMUST00000158868 186 ntBASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Gm44008-201ENSMUST00000204345 412 ntBASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Gm44651-201ENSMUST00000207343 372 ntBASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Gm5363-201ENSMUST00000211927 938 ntBASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms