Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Tff1Q08423 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
Tff1Q08423 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC9.48□□□□□ -0.89
Tff1Q08423 Gm38314-201ENSMUST00000195709 625 ntBASIC9.48□□□□□ -0.89
Tff1Q08423 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC9.48□□□□□ -0.89
Tff1Q08423 Gm8956-201ENSMUST00000203939 825 ntBASIC9.48□□□□□ -0.89
Tff1Q08423 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC9.48□□□□□ -0.89
Tff1Q08423 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Gm45598-202ENSMUST00000210719 986 ntBASIC9.48□□□□□ -0.89
Tff1Q08423 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC9.48□□□□□ -0.89
Tff1Q08423 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Ntng1-201ENSMUST00000051253 327 ntBASIC9.48□□□□□ -0.89
Tff1Q08423 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC9.48□□□□□ -0.89
Tff1Q08423 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.48□□□□□ -0.89
Tff1Q08423 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Tff1Q08423 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
Tff1Q08423 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC9.48□□□□□ -0.89
Tff1Q08423 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Tff1Q08423 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Tff1Q08423 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC9.48□□□□□ -0.89
Tff1Q08423 Gm44573-201ENSMUST00000191753 2370 ntBASIC9.48□□□□□ -0.89
Tff1Q08423 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Tff1Q08423 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Tff1Q08423 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Tff1Q08423 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Tff1Q08423 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Tff1Q08423 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Gm15004-201ENSMUST00000119192 630 ntBASIC9.47□□□□□ -0.89
Tff1Q08423 Gm8566-201ENSMUST00000120174 465 ntBASIC9.47□□□□□ -0.89
Tff1Q08423 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.47□□□□□ -0.89
Tff1Q08423 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Tff1Q08423 Gm9555-201ENSMUST00000200908 583 ntBASIC9.47□□□□□ -0.89
Tff1Q08423 Gm19187-201ENSMUST00000206781 892 ntBASIC9.47□□□□□ -0.89
Tff1Q08423 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC9.47□□□□□ -0.89
Tff1Q08423 AC135469.1-201ENSMUST00000225984 772 ntBASIC9.47□□□□□ -0.89
Tff1Q08423 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Tff1Q08423 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Tff1Q08423 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC9.47□□□□□ -0.89
Tff1Q08423 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.47□□□□□ -0.89
Tff1Q08423 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Tff1Q08423 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.46□□□□□ -0.89
Tff1Q08423 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Tff1Q08423 Gm42706-201ENSMUST00000199733 1910 ntBASIC9.46□□□□□ -0.89
Tff1Q08423 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Tff1Q08423 Gm37580-201ENSMUST00000192408 2800 ntBASIC9.46□□□□□ -0.89
Tff1Q08423 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Tff1Q08423 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Tff1Q08423 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms