Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx4Q07424 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx4Q07424 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx4Q07424 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC8.85□□□□□ -0.99
Cdx4Q07424 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx4Q07424 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx4Q07424 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx4Q07424 Gm44152-201ENSMUST00000205007 1691 ntBASIC8.85□□□□□ -0.99
Cdx4Q07424 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC8.84□□□□□ -0.99
Cdx4Q07424 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
Cdx4Q07424 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Gm10152-201ENSMUST00000193475 1344 ntBASIC8.84□□□□□ -0.99
Cdx4Q07424 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC8.84□□□□□ -0.99
Cdx4Q07424 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC8.84□□□□□ -0.99
Cdx4Q07424 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Cdx4Q07424 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Cdx4Q07424 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Gm12165-201ENSMUST00000117047 342 ntBASIC8.84□□□□□ -0.99
Cdx4Q07424 Gm14724-201ENSMUST00000118400 537 ntBASIC8.84□□□□□ -0.99
Cdx4Q07424 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC8.84□□□□□ -0.99
Cdx4Q07424 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Cdx4Q07424 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Gm10051-201ENSMUST00000145209 414 ntBASIC8.84□□□□□ -0.99
Cdx4Q07424 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
Cdx4Q07424 Gm23699-201ENSMUST00000158835 135 ntBASIC8.84□□□□□ -0.99
Cdx4Q07424 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC8.84□□□□□ -0.99
Cdx4Q07424 Gm5523-201ENSMUST00000180415 997 ntBASIC8.84□□□□□ -0.99
Cdx4Q07424 Gm28686-201ENSMUST00000187404 609 ntBASIC8.84□□□□□ -0.99
Cdx4Q07424 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
Cdx4Q07424 Ighv1-48-201ENSMUST00000191795 294 ntBASIC8.84□□□□□ -0.99
Cdx4Q07424 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
Cdx4Q07424 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC8.84□□□□□ -0.99
Cdx4Q07424 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC8.84□□□□□ -0.99
Cdx4Q07424 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC8.84□□□□□ -0.99
Cdx4Q07424 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC8.84□□□□□ -0.99
Cdx4Q07424 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 AC211878.3-201ENSMUST00000222629 2018 ntBASIC8.84□□□□□ -0.99
Cdx4Q07424 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC8.84□□□□□ -0.99
Cdx4Q07424 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Cdx4Q07424 Gm8420-201ENSMUST00000097103 598 ntBASIC8.84□□□□□ -0.99
Cdx4Q07424 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC8.84□□□□□ -0.99
Cdx4Q07424 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Cdx4Q07424 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC8.84□□□□□ -0.99
Cdx4Q07424 AC124397.2-201ENSMUST00000225575 2215 ntBASIC8.84□□□□□ -0.99
Cdx4Q07424 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx4Q07424 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Cdx4Q07424 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC8.83□□□□□ -1
Cdx4Q07424 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC8.83□□□□□ -1
Cdx4Q07424 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC8.83□□□□□ -1
Cdx4Q07424 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Cdx4Q07424 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
Cdx4Q07424 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Cdx4Q07424 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Mir680-2-201ENSMUST00000102163 110 ntBASIC8.83□□□□□ -1
Cdx4Q07424 Gm23251-201ENSMUST00000103773 110 ntBASIC8.83□□□□□ -1
Cdx4Q07424 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC8.83□□□□□ -1
Cdx4Q07424 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx4Q07424 Gm12857-201ENSMUST00000117678 592 ntBASIC8.83□□□□□ -1
Cdx4Q07424 Gm11663-201ENSMUST00000117888 290 ntBASIC8.83□□□□□ -1
Cdx4Q07424 Gm15131-201ENSMUST00000119124 595 ntBASIC8.83□□□□□ -1
Cdx4Q07424 Gm15004-201ENSMUST00000119192 630 ntBASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms