Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm25299-201ENSMUST00000175283 102 ntBASIC14.28□□□□□ -0.12
Nkx2-3P97334 Gm23798-201ENSMUST00000175560 102 ntBASIC14.28□□□□□ -0.12
Nkx2-3P97334 Gm23802-201ENSMUST00000175565 102 ntBASIC14.28□□□□□ -0.12
Nkx2-3P97334 Gm25708-201ENSMUST00000177687 102 ntBASIC14.28□□□□□ -0.12
Nkx2-3P97334 Gm24370-201ENSMUST00000178007 102 ntBASIC14.28□□□□□ -0.12
Nkx2-3P97334 Gm23049-201ENSMUST00000178068 102 ntBASIC14.28□□□□□ -0.12
Nkx2-3P97334 Gm28019-201ENSMUST00000178138 101 ntBASIC14.28□□□□□ -0.12
Nkx2-3P97334 Gm25571-201ENSMUST00000178322 102 ntBASIC14.28□□□□□ -0.12
Nkx2-3P97334 Gm25355-201ENSMUST00000178456 101 ntBASIC14.28□□□□□ -0.12
Nkx2-3P97334 Gm24975-201ENSMUST00000178492 101 ntBASIC14.28□□□□□ -0.12
Nkx2-3P97334 Gm23189-201ENSMUST00000178954 102 ntBASIC14.28□□□□□ -0.12
Nkx2-3P97334 Gm25100-201ENSMUST00000179750 101 ntBASIC14.28□□□□□ -0.12
Nkx2-3P97334 Gm23064-201ENSMUST00000179866 101 ntBASIC14.28□□□□□ -0.12
Nkx2-3P97334 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-3P97334 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-3P97334 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-3P97334 Gm9916-201ENSMUST00000192943 1228 ntBASIC14.28□□□□□ -0.12
Nkx2-3P97334 Gm43610-201ENSMUST00000199117 365 ntBASIC14.28□□□□□ -0.12
Nkx2-3P97334 Gm43452-201ENSMUST00000201873 991 ntBASIC14.28□□□□□ -0.12
Nkx2-3P97334 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-3P97334 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-3P97334 Gm4903-201ENSMUST00000210462 405 ntBASIC14.28□□□□□ -0.12
Nkx2-3P97334 AC129975.1-201ENSMUST00000224816 592 ntBASIC14.28□□□□□ -0.12
Nkx2-3P97334 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-3P97334 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-3P97334 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC14.28□□□□□ -0.12
Nkx2-3P97334 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-3P97334 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nkx2-3P97334 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC14.28□□□□□ -0.12
Nkx2-3P97334 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.27□□□□□ -0.12
Nkx2-3P97334 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC14.27□□□□□ -0.12
Nkx2-3P97334 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-3P97334 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-3P97334 Gm6831-202ENSMUST00000213025 1673 ntBASIC14.27□□□□□ -0.12
Nkx2-3P97334 Gm43972-201ENSMUST00000181398 1467 ntBASIC14.27□□□□□ -0.12
Nkx2-3P97334 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Nkx2-3P97334 Adgrv1-214ENSMUST00000224088 1492 ntBASIC14.27□□□□□ -0.12
Nkx2-3P97334 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-3P97334 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx2-3P97334 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Nkx2-3P97334 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Nkx2-3P97334 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.27□□□□□ -0.13
Nkx2-3P97334 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.27□□□□□ -0.13
Nkx2-3P97334 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nkx2-3P97334 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-3P97334 Gm12986-201ENSMUST00000119037 967 ntBASIC14.27□□□□□ -0.13
Nkx2-3P97334 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Nkx2-3P97334 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC14.27□□□□□ -0.13
Nkx2-3P97334 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Nkx2-3P97334 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC14.27□□□□□ -0.13
Nkx2-3P97334 Gm18014-201ENSMUST00000183369 817 ntBASIC14.27□□□□□ -0.13
Nkx2-3P97334 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Nkx2-3P97334 Gm9204-201ENSMUST00000212641 947 ntBASIC14.27□□□□□ -0.13
Nkx2-3P97334 AC162932.1-201ENSMUST00000219209 872 ntBASIC14.27□□□□□ -0.13
Nkx2-3P97334 AC134601.2-201ENSMUST00000221071 130 ntBASIC14.27□□□□□ -0.13
Nkx2-3P97334 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC14.27□□□□□ -0.13
Nkx2-3P97334 AC154435.1-201ENSMUST00000223938 959 ntBASIC14.27□□□□□ -0.13
Nkx2-3P97334 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-3P97334 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-3P97334 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Nkx2-3P97334 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-3P97334 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-3P97334 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-3P97334 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-3P97334 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-3P97334 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-3P97334 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx2-3P97334 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC14.26□□□□□ -0.13
Nkx2-3P97334 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC14.26□□□□□ -0.13
Nkx2-3P97334 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nkx2-3P97334 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-3P97334 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Gm42867-201ENSMUST00000202995 469 ntBASIC14.26□□□□□ -0.13
Nkx2-3P97334 Gm18010-201ENSMUST00000203553 202 ntBASIC14.26□□□□□ -0.13
Nkx2-3P97334 AC159246.1-201ENSMUST00000214478 249 ntBASIC14.26□□□□□ -0.13
Nkx2-3P97334 BC106175-202ENSMUST00000219344 1213 ntBASIC14.26□□□□□ -0.13
Nkx2-3P97334 AC164429.1-201ENSMUST00000224210 518 ntBASIC14.26□□□□□ -0.13
Nkx2-3P97334 AC169511.1-201ENSMUST00000227639 995 ntBASIC14.26□□□□□ -0.13
Nkx2-3P97334 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-3P97334 AC090962.2-201ENSMUST00000225064 1801 ntBASIC14.26□□□□□ -0.13
Nkx2-3P97334 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC14.26□□□□□ -0.13
Nkx2-3P97334 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms