Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trim43cP86449 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trim43cP86449 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43cP86449 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43cP86449 Gm45206-201ENSMUST00000206885 2285 ntBASIC12.4□□□□□ -0.42
Trim43cP86449 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
Trim43cP86449 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43cP86449 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43cP86449 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trim43cP86449 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43cP86449 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trim43cP86449 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.4□□□□□ -0.42
Trim43cP86449 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim43cP86449 Gm4726-201ENSMUST00000135604 736 ntBASIC12.4□□□□□ -0.42
Trim43cP86449 Gm6019-201ENSMUST00000148369 736 ntBASIC12.4□□□□□ -0.42
Trim43cP86449 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim43cP86449 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43cP86449 Gm10731-201ENSMUST00000181171 448 ntBASIC12.4□□□□□ -0.42
Trim43cP86449 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim43cP86449 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.4□□□□□ -0.42
Trim43cP86449 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim43cP86449 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43cP86449 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim43cP86449 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.4□□□□□ -0.42
Trim43cP86449 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.4□□□□□ -0.42
Trim43cP86449 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim43cP86449 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trim43cP86449 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trim43cP86449 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Trim43cP86449 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43cP86449 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43cP86449 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43cP86449 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.4□□□□□ -0.42
Trim43cP86449 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.4□□□□□ -0.42
Trim43cP86449 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43cP86449 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43cP86449 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim43cP86449 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim43cP86449 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim43cP86449 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim43cP86449 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim43cP86449 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim43cP86449 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.39□□□□□ -0.43
Trim43cP86449 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim43cP86449 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Gm23272-201ENSMUST00000104053 129 ntBASIC12.39□□□□□ -0.43
Trim43cP86449 Snord17-201ENSMUST00000104526 238 ntBASIC12.39□□□□□ -0.43
Trim43cP86449 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trim43cP86449 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.39□□□□□ -0.43
Trim43cP86449 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.39□□□□□ -0.43
Trim43cP86449 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim43cP86449 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Gm23045-201ENSMUST00000175041 96 ntBASIC12.39□□□□□ -0.43
Trim43cP86449 Gm43186-201ENSMUST00000198130 824 ntBASIC12.39□□□□□ -0.43
Trim43cP86449 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Gm42867-201ENSMUST00000202995 469 ntBASIC12.39□□□□□ -0.43
Trim43cP86449 Gm17831-201ENSMUST00000205579 900 ntBASIC12.39□□□□□ -0.43
Trim43cP86449 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trim43cP86449 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.39□□□□□ -0.43
Trim43cP86449 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Trim43cP86449 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trim43cP86449 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim43cP86449 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim43cP86449 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trim43cP86449 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim43cP86449 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim43cP86449 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim43cP86449 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 CT009713.5-203ENSMUST00000224218 2079 ntBASIC12.38□□□□□ -0.43
Trim43cP86449 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Gm12463-201ENSMUST00000118271 849 ntBASIC12.38□□□□□ -0.43
Trim43cP86449 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms