Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SgcaP82350 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
SgcaP82350 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
SgcaP82350 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
SgcaP82350 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SgcaP82350 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
SgcaP82350 Adh6-ps1-201ENSMUST00000171054 2789 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SgcaP82350 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
SgcaP82350 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SgcaP82350 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.56□□□□□ -0.88
SgcaP82350 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SgcaP82350 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
SgcaP82350 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SgcaP82350 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SgcaP82350 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
SgcaP82350 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC9.55□□□□□ -0.88
SgcaP82350 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
SgcaP82350 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
SgcaP82350 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
SgcaP82350 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
SgcaP82350 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
SgcaP82350 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC9.55□□□□□ -0.88
SgcaP82350 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC9.55□□□□□ -0.88
SgcaP82350 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
SgcaP82350 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
SgcaP82350 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.55□□□□□ -0.88
SgcaP82350 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
SgcaP82350 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC9.55□□□□□ -0.88
SgcaP82350 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC9.55□□□□□ -0.88
SgcaP82350 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC9.55□□□□□ -0.88
SgcaP82350 Gm37737-201ENSMUST00000195013 1638 ntBASIC9.55□□□□□ -0.88
SgcaP82350 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Tmem63a-201ENSMUST00000027800 3306 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
SgcaP82350 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
SgcaP82350 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC9.55□□□□□ -0.88
SgcaP82350 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
SgcaP82350 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
SgcaP82350 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC9.54□□□□□ -0.88
SgcaP82350 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC9.54□□□□□ -0.88
SgcaP82350 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC9.54□□□□□ -0.88
SgcaP82350 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.54□□□□□ -0.88
SgcaP82350 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC9.54□□□□□ -0.88
SgcaP82350 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC9.54□□□□□ -0.88
SgcaP82350 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC9.54□□□□□ -0.88
SgcaP82350 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC9.54□□□□□ -0.88
SgcaP82350 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
SgcaP82350 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
SgcaP82350 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC9.54□□□□□ -0.88
SgcaP82350 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC9.54□□□□□ -0.88
SgcaP82350 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.54□□□□□ -0.88
SgcaP82350 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
SgcaP82350 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
SgcaP82350 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Gm43127-201ENSMUST00000195890 2789 ntBASIC9.54□□□□□ -0.88
SgcaP82350 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SgcaP82350 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms