Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.24□□□□□ -0.77
SgcbP82349 Gm43081-201ENSMUST00000199082 1380 ntBASIC10.24□□□□□ -0.77
SgcbP82349 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SgcbP82349 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcbP82349 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcbP82349 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcbP82349 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
SgcbP82349 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcbP82349 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
SgcbP82349 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
SgcbP82349 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
SgcbP82349 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
SgcbP82349 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.23□□□□□ -0.77
SgcbP82349 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.23□□□□□ -0.77
SgcbP82349 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.23□□□□□ -0.77
SgcbP82349 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.23□□□□□ -0.77
SgcbP82349 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC10.23□□□□□ -0.77
SgcbP82349 Gm11836-201ENSMUST00000121022 441 ntBASIC10.23□□□□□ -0.77
SgcbP82349 Gm9089-201ENSMUST00000122027 526 ntBASIC10.23□□□□□ -0.77
SgcbP82349 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC10.23□□□□□ -0.77
SgcbP82349 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Gm15881-201ENSMUST00000148792 942 ntBASIC10.23□□□□□ -0.77
SgcbP82349 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Mir6546-201ENSMUST00000184460 62 ntBASIC10.23□□□□□ -0.77
SgcbP82349 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC10.23□□□□□ -0.77
SgcbP82349 Gm37981-201ENSMUST00000194280 535 ntBASIC10.23□□□□□ -0.77
SgcbP82349 Gm43186-201ENSMUST00000198130 824 ntBASIC10.23□□□□□ -0.77
SgcbP82349 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC10.23□□□□□ -0.77
SgcbP82349 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC10.23□□□□□ -0.77
SgcbP82349 AC125486.1-201ENSMUST00000218701 320 ntBASIC10.23□□□□□ -0.77
SgcbP82349 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.23□□□□□ -0.77
SgcbP82349 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.23□□□□□ -0.77
SgcbP82349 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
SgcbP82349 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
SgcbP82349 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.23□□□□□ -0.77
SgcbP82349 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
SgcbP82349 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.23□□□□□ -0.77
SgcbP82349 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.23□□□□□ -0.77
SgcbP82349 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.23□□□□□ -0.77
SgcbP82349 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.23□□□□□ -0.77
SgcbP82349 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
SgcbP82349 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
SgcbP82349 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.23□□□□□ -0.77
SgcbP82349 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SgcbP82349 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
SgcbP82349 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
SgcbP82349 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
SgcbP82349 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.22□□□□□ -0.77
SgcbP82349 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.22□□□□□ -0.77
SgcbP82349 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.22□□□□□ -0.77
SgcbP82349 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
SgcbP82349 Gm15131-201ENSMUST00000119124 595 ntBASIC10.22□□□□□ -0.77
SgcbP82349 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.22□□□□□ -0.77
SgcbP82349 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
SgcbP82349 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SgcbP82349 Gm19459-201ENSMUST00000176240 835 ntBASIC10.22□□□□□ -0.77
SgcbP82349 Gm8574-201ENSMUST00000203207 924 ntBASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms