Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Shox2P70390 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shox2P70390 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC11.21□□□□□ -0.61
Shox2P70390 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shox2P70390 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shox2P70390 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shox2P70390 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shox2P70390 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shox2P70390 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.21□□□□□ -0.61
Shox2P70390 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.21□□□□□ -0.61
Shox2P70390 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shox2P70390 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.21□□□□□ -0.61
Shox2P70390 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shox2P70390 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Shox2P70390 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shox2P70390 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shox2P70390 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shox2P70390 Gm11989-201ENSMUST00000117240 672 ntBASIC11.21□□□□□ -0.61
Shox2P70390 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shox2P70390 Gm11362-201ENSMUST00000118838 850 ntBASIC11.21□□□□□ -0.61
Shox2P70390 Gm16177-201ENSMUST00000120728 718 ntBASIC11.21□□□□□ -0.61
Shox2P70390 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shox2P70390 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shox2P70390 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Shox2P70390 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.21□□□□□ -0.61
Shox2P70390 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.21□□□□□ -0.61
Shox2P70390 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Shox2P70390 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.21□□□□□ -0.61
Shox2P70390 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shox2P70390 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.21□□□□□ -0.61
Shox2P70390 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.21□□□□□ -0.61
Shox2P70390 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shox2P70390 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shox2P70390 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Shox2P70390 Gm5356-201ENSMUST00000093326 615 ntBASIC11.21□□□□□ -0.61
Shox2P70390 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Shox2P70390 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Shox2P70390 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shox2P70390 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Shox2P70390 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Shox2P70390 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC11.21□□□□□ -0.62
Shox2P70390 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Shox2P70390 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Shox2P70390 Kirrel3-201ENSMUST00000045091 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Shox2P70390 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Shox2P70390 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Shox2P70390 Gm7103-201ENSMUST00000195642 1852 ntBASIC11.21□□□□□ -0.62
Shox2P70390 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Shox2P70390 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Shox2P70390 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
Shox2P70390 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC11.21□□□□□ -0.62
Shox2P70390 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Shox2P70390 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.2□□□□□ -0.62
Shox2P70390 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.2□□□□□ -0.62
Shox2P70390 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.2□□□□□ -0.62
Shox2P70390 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Shox2P70390 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Shox2P70390 Copb1-201ENSMUST00000033012 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Shox2P70390 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.2□□□□□ -0.62
Shox2P70390 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Shox2P70390 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.2□□□□□ -0.62
Shox2P70390 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 Gm14644-201ENSMUST00000116671 647 ntBASIC11.2□□□□□ -0.62
Shox2P70390 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Shox2P70390 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.2□□□□□ -0.62
Shox2P70390 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.2□□□□□ -0.62
Shox2P70390 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.2□□□□□ -0.62
Shox2P70390 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 Gm9353-201ENSMUST00000200472 604 ntBASIC11.2□□□□□ -0.62
Shox2P70390 Gm45384-201ENSMUST00000210451 277 ntBASIC11.2□□□□□ -0.62
Shox2P70390 Gm7561-201ENSMUST00000211203 886 ntBASIC11.2□□□□□ -0.62
Shox2P70390 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Shox2P70390 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Shox2P70390 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Shox2P70390 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC11.2□□□□□ -0.62
Shox2P70390 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shox2P70390 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms