Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Lsm5P62322 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Lsm5P62322 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Lsm5P62322 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
Lsm5P62322 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC9.44□□□□□ -0.9
Lsm5P62322 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC9.44□□□□□ -0.9
Lsm5P62322 Gm7183-201ENSMUST00000213870 1005 ntBASIC9.44□□□□□ -0.9
Lsm5P62322 Gm7293-201ENSMUST00000216682 1007 ntBASIC9.44□□□□□ -0.9
Lsm5P62322 Gm18065-201ENSMUST00000221395 526 ntBASIC9.44□□□□□ -0.9
Lsm5P62322 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC9.44□□□□□ -0.9
Lsm5P62322 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Lsm5P62322 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lsm5P62322 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Lsm5P62322 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm5P62322 Cacna1c-214ENSMUST00000188106 6462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm5P62322 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm5P62322 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Lsm5P62322 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
Lsm5P62322 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm5P62322 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm5P62322 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC9.43□□□□□ -0.9
Lsm5P62322 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm5P62322 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Lsm5P62322 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC9.43□□□□□ -0.9
Lsm5P62322 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm5P62322 AC126444.1-201ENSMUST00000225938 1768 ntBASIC9.43□□□□□ -0.9
Lsm5P62322 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC9.43□□□□□ -0.9
Lsm5P62322 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm5P62322 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Lsm5P62322 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.43□□□□□ -0.9
Lsm5P62322 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm5P62322 Phtf1os-201ENSMUST00000160110 4046 ntBASIC9.43□□□□□ -0.9
Lsm5P62322 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm5P62322 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Lsm5P62322 Gm14832-201ENSMUST00000121289 322 ntBASIC9.43□□□□□ -0.9
Lsm5P62322 Gm8908-201ENSMUST00000121633 1024 ntBASIC9.43□□□□□ -0.9
Lsm5P62322 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC9.43□□□□□ -0.9
Lsm5P62322 Gm25043-201ENSMUST00000158604 212 ntBASIC9.43□□□□□ -0.9
Lsm5P62322 Gm6548-201ENSMUST00000167498 1165 ntBASIC9.43□□□□□ -0.9
Lsm5P62322 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm5P62322 Gm5866-201ENSMUST00000177881 973 ntBASIC9.43□□□□□ -0.9
Lsm5P62322 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC9.43□□□□□ -0.9
Lsm5P62322 Gm42627-201ENSMUST00000197347 224 ntBASIC9.43□□□□□ -0.9
Lsm5P62322 Gm6745-201ENSMUST00000199216 526 ntBASIC9.43□□□□□ -0.9
Lsm5P62322 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm5P62322 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm5P62322 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Lsm5P62322 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm5P62322 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Lsm5P62322 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm5P62322 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm5P62322 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm5P62322 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm5P62322 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm5P62322 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm5P62322 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Lsm5P62322 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm5P62322 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm5P62322 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Lsm5P62322 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm5P62322 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC9.42□□□□□ -0.9
Lsm5P62322 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm5P62322 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm5P62322 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm5P62322 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC9.42□□□□□ -0.9
Lsm5P62322 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Lsm5P62322 CT868720.1-201ENSMUST00000223069 2544 ntBASIC9.42□□□□□ -0.9
Lsm5P62322 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Lsm5P62322 Gm19221-201ENSMUST00000221827 1477 ntBASIC9.42□□□□□ -0.9
Lsm5P62322 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm5P62322 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm5P62322 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Lsm5P62322 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm5P62322 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm5P62322 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Lsm5P62322 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Lsm5P62322 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms