Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nphp4P59240 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nphp4P59240 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nphp4P59240 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nphp4P59240 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nphp4P59240 Gm13039-201ENSMUST00000118638 794 ntBASIC15.3■□□□□ 0.04
Nphp4P59240 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC15.3■□□□□ 0.04
Nphp4P59240 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nphp4P59240 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nphp4P59240 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC15.3■□□□□ 0.04
Nphp4P59240 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nphp4P59240 Gm44605-201ENSMUST00000206892 949 ntBASIC15.3■□□□□ 0.04
Nphp4P59240 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC15.3■□□□□ 0.04
Nphp4P59240 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nphp4P59240 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nphp4P59240 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Nphp4P59240 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nphp4P59240 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nphp4P59240 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nphp4P59240 Gm19027-201ENSMUST00000187291 1355 ntBASIC15.3■□□□□ 0.04
Nphp4P59240 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nphp4P59240 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nphp4P59240 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nphp4P59240 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nphp4P59240 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nphp4P59240 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC15.3■□□□□ 0.04
Nphp4P59240 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nphp4P59240 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nphp4P59240 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nphp4P59240 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nphp4P59240 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nphp4P59240 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nphp4P59240 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nphp4P59240 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nphp4P59240 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nphp4P59240 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nphp4P59240 Mir6941-201ENSMUST00000184711 59 ntBASIC15.29■□□□□ 0.04
Nphp4P59240 Gm19918-201ENSMUST00000194858 400 ntBASIC15.29■□□□□ 0.04
Nphp4P59240 CT010480.2-201ENSMUST00000225424 737 ntBASIC15.29■□□□□ 0.04
Nphp4P59240 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Nphp4P59240 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nphp4P59240 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nphp4P59240 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Nphp4P59240 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nphp4P59240 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nphp4P59240 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nphp4P59240 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nphp4P59240 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nphp4P59240 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nphp4P59240 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nphp4P59240 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nphp4P59240 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nphp4P59240 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nphp4P59240 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nphp4P59240 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nphp4P59240 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nphp4P59240 Gm44663-201ENSMUST00000206898 3150 ntBASIC15.28■□□□□ 0.04
Nphp4P59240 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nphp4P59240 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nphp4P59240 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nphp4P59240 Gm45206-201ENSMUST00000206885 2285 ntBASIC15.28■□□□□ 0.04
Nphp4P59240 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC15.28■□□□□ 0.04
Nphp4P59240 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nphp4P59240 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nphp4P59240 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC15.28■□□□□ 0.04
Nphp4P59240 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC15.28■□□□□ 0.04
Nphp4P59240 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nphp4P59240 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC15.28■□□□□ 0.04
Nphp4P59240 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nphp4P59240 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nphp4P59240 Gm14274-201ENSMUST00000117182 615 ntBASIC15.28■□□□□ 0.04
Nphp4P59240 Gm5257-201ENSMUST00000121823 790 ntBASIC15.28■□□□□ 0.04
Nphp4P59240 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nphp4P59240 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nphp4P59240 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nphp4P59240 Gm8451-201ENSMUST00000170338 447 ntBASIC15.28■□□□□ 0.04
Nphp4P59240 Gm18733-202ENSMUST00000174447 401 ntBASIC15.28■□□□□ 0.04
Nphp4P59240 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nphp4P59240 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Nphp4P59240 Gm44552-201ENSMUST00000205458 1247 ntBASIC15.28■□□□□ 0.04
Nphp4P59240 Gm45085-201ENSMUST00000209100 441 ntBASIC15.28■□□□□ 0.04
Nphp4P59240 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nphp4P59240 AC134793.1-202ENSMUST00000227444 803 ntBASIC15.28■□□□□ 0.04
Nphp4P59240 Gm5453-201ENSMUST00000080866 447 ntBASIC15.28■□□□□ 0.04
Nphp4P59240 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nphp4P59240 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nphp4P59240 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nphp4P59240 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nphp4P59240 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nphp4P59240 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nphp4P59240 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Nphp4P59240 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nphp4P59240 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nphp4P59240 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nphp4P59240 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nphp4P59240 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC15.28■□□□□ 0.04
Nphp4P59240 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nphp4P59240 Gm18210-201ENSMUST00000209001 1524 ntBASIC15.28■□□□□ 0.04
Nphp4P59240 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Nphp4P59240 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms