Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm18968-201ENSMUST00000221319 862 ntBASIC12.16□□□□□ -0.46
NrlP54846 Gm6722-201ENSMUST00000221586 390 ntBASIC12.16□□□□□ -0.46
NrlP54846 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.16□□□□□ -0.46
NrlP54846 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NrlP54846 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.16□□□□□ -0.46
NrlP54846 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
NrlP54846 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NrlP54846 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.16□□□□□ -0.46
NrlP54846 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
NrlP54846 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
NrlP54846 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
NrlP54846 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
NrlP54846 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NrlP54846 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NrlP54846 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.16□□□□□ -0.46
NrlP54846 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NrlP54846 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.15□□□□□ -0.46
NrlP54846 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NrlP54846 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NrlP54846 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.15□□□□□ -0.46
NrlP54846 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NrlP54846 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NrlP54846 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NrlP54846 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.15□□□□□ -0.46
NrlP54846 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NrlP54846 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.15□□□□□ -0.46
NrlP54846 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NrlP54846 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NrlP54846 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.15□□□□□ -0.46
NrlP54846 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NrlP54846 Gm24791-201ENSMUST00000104284 131 ntBASIC12.15□□□□□ -0.46
NrlP54846 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.15□□□□□ -0.46
NrlP54846 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.15□□□□□ -0.46
NrlP54846 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.15□□□□□ -0.46
NrlP54846 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.15□□□□□ -0.46
NrlP54846 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.15□□□□□ -0.46
NrlP54846 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
NrlP54846 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.15□□□□□ -0.46
NrlP54846 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.15□□□□□ -0.46
NrlP54846 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.15□□□□□ -0.46
NrlP54846 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NrlP54846 Gm39288-201ENSMUST00000210554 446 ntBASIC12.15□□□□□ -0.46
NrlP54846 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.15□□□□□ -0.46
NrlP54846 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.15□□□□□ -0.46
NrlP54846 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.15□□□□□ -0.46
NrlP54846 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.15□□□□□ -0.46
NrlP54846 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NrlP54846 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
NrlP54846 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NrlP54846 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NrlP54846 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NrlP54846 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NrlP54846 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
NrlP54846 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NrlP54846 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NrlP54846 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
NrlP54846 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
NrlP54846 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
NrlP54846 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
NrlP54846 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
NrlP54846 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NrlP54846 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NrlP54846 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NrlP54846 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NrlP54846 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NrlP54846 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
NrlP54846 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NrlP54846 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NrlP54846 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
NrlP54846 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NrlP54846 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.14□□□□□ -0.47
NrlP54846 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NrlP54846 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NrlP54846 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NrlP54846 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NrlP54846 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
NrlP54846 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NrlP54846 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NrlP54846 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NrlP54846 Gm25053-201ENSMUST00000103982 133 ntBASIC12.14□□□□□ -0.47
NrlP54846 Gm25922-201ENSMUST00000104281 130 ntBASIC12.14□□□□□ -0.47
NrlP54846 Gm15329-201ENSMUST00000121408 155 ntBASIC12.14□□□□□ -0.47
NrlP54846 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NrlP54846 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NrlP54846 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.14□□□□□ -0.47
NrlP54846 Gm25492-201ENSMUST00000157383 129 ntBASIC12.14□□□□□ -0.47
NrlP54846 Gm24679-201ENSMUST00000158762 111 ntBASIC12.14□□□□□ -0.47
NrlP54846 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.14□□□□□ -0.47
NrlP54846 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.14□□□□□ -0.47
NrlP54846 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NrlP54846 Gm28833-201ENSMUST00000189671 559 ntBASIC12.14□□□□□ -0.47
NrlP54846 Gm19587-201ENSMUST00000191395 545 ntBASIC12.14□□□□□ -0.47
NrlP54846 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NrlP54846 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.14□□□□□ -0.47
NrlP54846 Gm25053-202ENSMUST00000199731 132 ntBASIC12.14□□□□□ -0.47
NrlP54846 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.14□□□□□ -0.47
NrlP54846 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.14□□□□□ -0.47
NrlP54846 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
NrlP54846 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.14□□□□□ -0.47
NrlP54846 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms