Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lbx1P52955 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lbx1P52955 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lbx1P52955 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.11□□□□□ -0.63
Lbx1P52955 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lbx1P52955 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lbx1P52955 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lbx1P52955 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lbx1P52955 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Lbx1P52955 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lbx1P52955 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lbx1P52955 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lbx1P52955 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.11□□□□□ -0.63
Lbx1P52955 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Lbx1P52955 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.11□□□□□ -0.63
Lbx1P52955 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.1□□□□□ -0.63
Lbx1P52955 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.1□□□□□ -0.63
Lbx1P52955 Gm37582-201ENSMUST00000192953 1409 ntBASIC11.1□□□□□ -0.63
Lbx1P52955 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.1□□□□□ -0.63
Lbx1P52955 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.1□□□□□ -0.63
Lbx1P52955 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Lbx1P52955 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC11.1□□□□□ -0.63
Lbx1P52955 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.1□□□□□ -0.63
Lbx1P52955 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.1□□□□□ -0.63
Lbx1P52955 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC11.1□□□□□ -0.63
Lbx1P52955 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.1□□□□□ -0.63
Lbx1P52955 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.1□□□□□ -0.63
Lbx1P52955 Gm42908-201ENSMUST00000197508 870 ntBASIC11.1□□□□□ -0.63
Lbx1P52955 Gm44173-201ENSMUST00000204316 132 ntBASIC11.1□□□□□ -0.63
Lbx1P52955 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC11.1□□□□□ -0.63
Lbx1P52955 Gm9701-201ENSMUST00000077976 427 ntBASIC11.1□□□□□ -0.63
Lbx1P52955 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.1□□□□□ -0.63
Lbx1P52955 Oprk1-201ENSMUST00000027038 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.1□□□□□ -0.63
Lbx1P52955 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.1□□□□□ -0.63
Lbx1P52955 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.1□□□□□ -0.63
Lbx1P52955 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Lbx1P52955 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lbx1P52955 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.09□□□□□ -0.63
Lbx1P52955 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.09□□□□□ -0.63
Lbx1P52955 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Lbx1P52955 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.09□□□□□ -0.63
Lbx1P52955 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Lbx1P52955 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.09□□□□□ -0.63
Lbx1P52955 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Lbx1P52955 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Gm17825-201ENSMUST00000206836 794 ntBASIC11.09□□□□□ -0.63
Lbx1P52955 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Gm5996-201ENSMUST00000211110 718 ntBASIC11.09□□□□□ -0.63
Lbx1P52955 Gm18504-201ENSMUST00000220917 929 ntBASIC11.09□□□□□ -0.63
Lbx1P52955 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Lbx1P52955 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Lbx1P52955 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.09□□□□□ -0.63
Lbx1P52955 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Lbx1P52955 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms