Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SqleP52019 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.4□□□□□ -0.42
SqleP52019 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
SqleP52019 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC12.4□□□□□ -0.42
SqleP52019 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SqleP52019 Gm18733-202ENSMUST00000174447 401 ntBASIC12.4□□□□□ -0.42
SqleP52019 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC12.4□□□□□ -0.42
SqleP52019 Gm29543-201ENSMUST00000188138 967 ntBASIC12.4□□□□□ -0.42
SqleP52019 Gm37723-201ENSMUST00000194480 565 ntBASIC12.4□□□□□ -0.42
SqleP52019 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
SqleP52019 Wbp1-209ENSMUST00000205023 716 ntBASIC12.4□□□□□ -0.42
SqleP52019 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC12.4□□□□□ -0.42
SqleP52019 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC12.4□□□□□ -0.42
SqleP52019 AC117769.1-201ENSMUST00000224716 1120 ntBASIC12.4□□□□□ -0.42
SqleP52019 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SqleP52019 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SqleP52019 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SqleP52019 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SqleP52019 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SqleP52019 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SqleP52019 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
SqleP52019 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SqleP52019 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SqleP52019 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SqleP52019 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.4□□□□□ -0.42
SqleP52019 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SqleP52019 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
SqleP52019 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.4□□□□□ -0.42
SqleP52019 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.4□□□□□ -0.43
SqleP52019 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
SqleP52019 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
SqleP52019 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SqleP52019 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SqleP52019 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.39□□□□□ -0.43
SqleP52019 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SqleP52019 Gm17836-201ENSMUST00000191976 1302 ntBASIC12.39□□□□□ -0.43
SqleP52019 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SqleP52019 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SqleP52019 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SqleP52019 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.39□□□□□ -0.43
SqleP52019 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SqleP52019 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SqleP52019 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SqleP52019 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SqleP52019 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SqleP52019 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SqleP52019 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SqleP52019 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SqleP52019 Gm14006-201ENSMUST00000122132 981 ntBASIC12.39□□□□□ -0.43
SqleP52019 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SqleP52019 Gm23582-201ENSMUST00000158530 139 ntBASIC12.39□□□□□ -0.43
SqleP52019 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.39□□□□□ -0.43
SqleP52019 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SqleP52019 Gm4705-201ENSMUST00000177415 354 ntBASIC12.39□□□□□ -0.43
SqleP52019 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SqleP52019 Kif4-ps-202ENSMUST00000185083 652 ntBASIC12.39□□□□□ -0.43
SqleP52019 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC12.39□□□□□ -0.43
SqleP52019 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC12.39□□□□□ -0.43
SqleP52019 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC12.39□□□□□ -0.43
SqleP52019 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC12.39□□□□□ -0.43
SqleP52019 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SqleP52019 n-R5s71-201ENSMUST00000093668 119 ntBASIC12.39□□□□□ -0.43
SqleP52019 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SqleP52019 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SqleP52019 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SqleP52019 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SqleP52019 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
SqleP52019 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SqleP52019 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SqleP52019 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
SqleP52019 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
SqleP52019 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
SqleP52019 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
SqleP52019 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SqleP52019 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
SqleP52019 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.39□□□□□ -0.43
SqleP52019 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SqleP52019 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SqleP52019 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SqleP52019 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SqleP52019 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
SqleP52019 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SqleP52019 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SqleP52019 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SqleP52019 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SqleP52019 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SqleP52019 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SqleP52019 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.38□□□□□ -0.43
SqleP52019 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SqleP52019 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SqleP52019 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
SqleP52019 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SqleP52019 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SqleP52019 Gm6755-201ENSMUST00000100598 864 ntBASIC12.38□□□□□ -0.43
SqleP52019 Gm6740-201ENSMUST00000100617 864 ntBASIC12.38□□□□□ -0.43
SqleP52019 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC12.38□□□□□ -0.43
SqleP52019 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC12.38□□□□□ -0.43
SqleP52019 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SqleP52019 Gm14071-201ENSMUST00000117817 509 ntBASIC12.38□□□□□ -0.43
SqleP52019 Gm12028-201ENSMUST00000118065 436 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms