Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.43□□□□□ -0.74
Nkx2-2P42586 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Gm23272-201ENSMUST00000104053 129 ntBASIC10.43□□□□□ -0.74
Nkx2-2P42586 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Gm15528-201ENSMUST00000117821 864 ntBASIC10.43□□□□□ -0.74
Nkx2-2P42586 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.43□□□□□ -0.74
Nkx2-2P42586 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.43□□□□□ -0.74
Nkx2-2P42586 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Gm23694-201ENSMUST00000179335 110 ntBASIC10.43□□□□□ -0.74
Nkx2-2P42586 Mir6546-201ENSMUST00000184460 62 ntBASIC10.43□□□□□ -0.74
Nkx2-2P42586 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.43□□□□□ -0.74
Nkx2-2P42586 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Gm29067-201ENSMUST00000190821 470 ntBASIC10.43□□□□□ -0.74
Nkx2-2P42586 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.43□□□□□ -0.74
Nkx2-2P42586 Gm37284-201ENSMUST00000193607 539 ntBASIC10.43□□□□□ -0.74
Nkx2-2P42586 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.43□□□□□ -0.74
Nkx2-2P42586 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.43□□□□□ -0.74
Nkx2-2P42586 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.43□□□□□ -0.74
Nkx2-2P42586 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.43□□□□□ -0.74
Nkx2-2P42586 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nkx2-2P42586 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.42□□□□□ -0.74
Nkx2-2P42586 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.42□□□□□ -0.74
Nkx2-2P42586 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Snord17-201ENSMUST00000104526 238 ntBASIC10.42□□□□□ -0.74
Nkx2-2P42586 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Gm11949-201ENSMUST00000117640 372 ntBASIC10.42□□□□□ -0.74
Nkx2-2P42586 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.42□□□□□ -0.74
Nkx2-2P42586 Gm15573-201ENSMUST00000119487 540 ntBASIC10.42□□□□□ -0.74
Nkx2-2P42586 Gm14395-201ENSMUST00000120494 563 ntBASIC10.42□□□□□ -0.74
Nkx2-2P42586 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nkx2-2P42586 Gm20426-201ENSMUST00000173657 440 ntBASIC10.42□□□□□ -0.74
Nkx2-2P42586 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms