Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rfc1P35601 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rfc1P35601 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfc1P35601 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Rfc1P35601 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Rfc1P35601 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rfc1P35601 Gm14441-201ENSMUST00000121960 540 ntBASIC12□□□□□ -0.49
Rfc1P35601 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12□□□□□ -0.49
Rfc1P35601 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfc1P35601 Gm27572-201ENSMUST00000183702 255 ntBASIC12□□□□□ -0.49
Rfc1P35601 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rfc1P35601 Gm42627-201ENSMUST00000197347 224 ntBASIC12□□□□□ -0.49
Rfc1P35601 Gm7619-201ENSMUST00000210649 1282 ntBASIC12□□□□□ -0.49
Rfc1P35601 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12□□□□□ -0.49
Rfc1P35601 Gm5186-201ENSMUST00000218781 920 ntBASIC12□□□□□ -0.49
Rfc1P35601 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Rfc1P35601 Gm7046-201ENSMUST00000221351 977 ntBASIC12□□□□□ -0.49
Rfc1P35601 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12□□□□□ -0.49
Rfc1P35601 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rfc1P35601 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfc1P35601 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rfc1P35601 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12□□□□□ -0.49
Rfc1P35601 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12□□□□□ -0.49
Rfc1P35601 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12□□□□□ -0.49
Rfc1P35601 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC12□□□□□ -0.49
Rfc1P35601 Gm43636-201ENSMUST00000201501 2235 ntBASIC12□□□□□ -0.49
Rfc1P35601 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rfc1P35601 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12□□□□□ -0.49
Rfc1P35601 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rfc1P35601 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12□□□□□ -0.49
Rfc1P35601 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfc1P35601 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfc1P35601 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rfc1P35601 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rfc1P35601 Gm43242-201ENSMUST00000199507 1776 ntBASIC12□□□□□ -0.49
Rfc1P35601 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rfc1P35601 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Rfc1P35601 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC11.99□□□□□ -0.49
Rfc1P35601 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC11.99□□□□□ -0.49
Rfc1P35601 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Rfc1P35601 Gm12742-201ENSMUST00000117326 410 ntBASIC11.99□□□□□ -0.49
Rfc1P35601 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.99□□□□□ -0.49
Rfc1P35601 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.99□□□□□ -0.49
Rfc1P35601 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.99□□□□□ -0.49
Rfc1P35601 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.99□□□□□ -0.49
Rfc1P35601 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.99□□□□□ -0.49
Rfc1P35601 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Rfc1P35601 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Gm5950-201ENSMUST00000213337 772 ntBASIC11.99□□□□□ -0.49
Rfc1P35601 Morn2-202ENSMUST00000227729 656 ntBASIC11.99□□□□□ -0.49
Rfc1P35601 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.99□□□□□ -0.49
Rfc1P35601 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.99□□□□□ -0.49
Rfc1P35601 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Rfc1P35601 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Rfc1P35601 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC11.99□□□□□ -0.49
Rfc1P35601 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.99□□□□□ -0.49
Rfc1P35601 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Gm19040-201ENSMUST00000203280 4726 ntBASIC11.99□□□□□ -0.49
Rfc1P35601 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.99□□□□□ -0.49
Rfc1P35601 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC11.99□□□□□ -0.49
Rfc1P35601 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Rfc1P35601 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Rfc1P35601 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfc1P35601 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfc1P35601 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfc1P35601 Erich3-203ENSMUST00000189969 3460 ntBASIC11.98□□□□□ -0.49
Rfc1P35601 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfc1P35601 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfc1P35601 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfc1P35601 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Rfc1P35601 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Rfc1P35601 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms