Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm3329-201ENSMUST00000159873 556 ntBASIC10.44□□□□□ -0.74
Nedd8P29595 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.44□□□□□ -0.74
Nedd8P29595 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nedd8P29595 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nedd8P29595 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nedd8P29595 Gm28911-201ENSMUST00000188837 117 ntBASIC10.44□□□□□ -0.74
Nedd8P29595 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.44□□□□□ -0.74
Nedd8P29595 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nedd8P29595 Gm43575-201ENSMUST00000196420 516 ntBASIC10.44□□□□□ -0.74
Nedd8P29595 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.44□□□□□ -0.74
Nedd8P29595 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nedd8P29595 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.44□□□□□ -0.74
Nedd8P29595 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nedd8P29595 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Nedd8P29595 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Nedd8P29595 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nedd8P29595 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Nedd8P29595 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nedd8P29595 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Nedd8P29595 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nedd8P29595 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Nedd8P29595 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nedd8P29595 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nedd8P29595 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nedd8P29595 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Nedd8P29595 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nedd8P29595 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nedd8P29595 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Nedd8P29595 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Nedd8P29595 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.43□□□□□ -0.74
Nedd8P29595 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Nedd8P29595 Mir1896-201ENSMUST00000122641 81 ntBASIC10.43□□□□□ -0.74
Nedd8P29595 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.43□□□□□ -0.74
Nedd8P29595 Gm28882-201ENSMUST00000185504 314 ntBASIC10.43□□□□□ -0.74
Nedd8P29595 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.43□□□□□ -0.74
Nedd8P29595 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.43□□□□□ -0.74
Nedd8P29595 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.43□□□□□ -0.74
Nedd8P29595 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.43□□□□□ -0.74
Nedd8P29595 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.43□□□□□ -0.74
Nedd8P29595 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.43□□□□□ -0.74
Nedd8P29595 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.43□□□□□ -0.74
Nedd8P29595 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.43□□□□□ -0.74
Nedd8P29595 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Nedd8P29595 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Nedd8P29595 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC10.43□□□□□ -0.74
Nedd8P29595 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nedd8P29595 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nedd8P29595 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Nedd8P29595 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nedd8P29595 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nedd8P29595 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nedd8P29595 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nedd8P29595 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nedd8P29595 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nedd8P29595 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Nedd8P29595 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.42□□□□□ -0.74
Nedd8P29595 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms