Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.72□□□□□ -0.37
Gjb1P28230 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Gjb1P28230 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gjb1P28230 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gjb1P28230 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Gjb1P28230 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Gjb1P28230 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Gjb1P28230 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gjb1P28230 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Gjb1P28230 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gjb1P28230 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gjb1P28230 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gjb1P28230 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gjb1P28230 Gm8111-201ENSMUST00000117659 987 ntBASIC12.71□□□□□ -0.37
Gjb1P28230 Gm14113-201ENSMUST00000121399 976 ntBASIC12.71□□□□□ -0.37
Gjb1P28230 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Gjb1P28230 Gm25394-201ENSMUST00000157338 133 ntBASIC12.71□□□□□ -0.37
Gjb1P28230 Gm22388-201ENSMUST00000158194 248 ntBASIC12.71□□□□□ -0.37
Gjb1P28230 Cd9-ps-201ENSMUST00000174687 650 ntBASIC12.71□□□□□ -0.37
Gjb1P28230 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC12.71□□□□□ -0.37
Gjb1P28230 Gm7572-201ENSMUST00000182616 766 ntBASIC12.71□□□□□ -0.37
Gjb1P28230 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Gjb1P28230 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Gjb1P28230 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gjb1P28230 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gjb1P28230 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gjb1P28230 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Gjb1P28230 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Gjb1P28230 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gjb1P28230 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Gjb1P28230 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Gjb1P28230 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gjb1P28230 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gjb1P28230 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Gjb1P28230 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gjb1P28230 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Gjb1P28230 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.71□□□□□ -0.38
Gjb1P28230 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gjb1P28230 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Gjb1P28230 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gjb1P28230 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Gjb1P28230 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 Gm22495-201ENSMUST00000104492 126 ntBASIC12.7□□□□□ -0.38
Gjb1P28230 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC12.7□□□□□ -0.38
Gjb1P28230 Gm8152-201ENSMUST00000120842 637 ntBASIC12.7□□□□□ -0.38
Gjb1P28230 Gm13281-201ENSMUST00000120871 567 ntBASIC12.7□□□□□ -0.38
Gjb1P28230 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC12.7□□□□□ -0.38
Gjb1P28230 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Gjb1P28230 Gm21778-201ENSMUST00000178779 471 ntBASIC12.7□□□□□ -0.38
Gjb1P28230 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Gjb1P28230 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 Zcwpw2-203ENSMUST00000187803 372 ntBASIC12.7□□□□□ -0.38
Gjb1P28230 Gm8226-201ENSMUST00000190511 798 ntBASIC12.7□□□□□ -0.38
Gjb1P28230 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.7□□□□□ -0.38
Gjb1P28230 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC12.7□□□□□ -0.38
Gjb1P28230 Gm5178-201ENSMUST00000219380 898 ntBASIC12.7□□□□□ -0.38
Gjb1P28230 AC154477.1-201ENSMUST00000226515 773 ntBASIC12.7□□□□□ -0.38
Gjb1P28230 AC137842.2-201ENSMUST00000227734 797 ntBASIC12.7□□□□□ -0.38
Gjb1P28230 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.7□□□□□ -0.38
Gjb1P28230 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 Gm10581-201ENSMUST00000097986 231 ntBASIC12.7□□□□□ -0.38
Gjb1P28230 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Gjb1P28230 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
Gjb1P28230 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Gjb1P28230 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC12.7□□□□□ -0.38
Gjb1P28230 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gjb1P28230 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms