Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.58□□□□□ -0.72
Cd40lgP27548 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.58□□□□□ -0.72
Cd40lgP27548 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.58□□□□□ -0.72
Cd40lgP27548 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cd40lgP27548 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.58□□□□□ -0.72
Cd40lgP27548 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Cd40lgP27548 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.58□□□□□ -0.72
Cd40lgP27548 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.58□□□□□ -0.72
Cd40lgP27548 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.58□□□□□ -0.72
Cd40lgP27548 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.58□□□□□ -0.72
Cd40lgP27548 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Gm7207-201ENSMUST00000211575 1067 ntBASIC10.58□□□□□ -0.72
Cd40lgP27548 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Cd40lgP27548 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Cd40lgP27548 Plekha6-201ENSMUST00000038295 7388 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.58□□□□□ -0.72
Cd40lgP27548 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cd40lgP27548 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.57□□□□□ -0.72
Cd40lgP27548 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.57□□□□□ -0.72
Cd40lgP27548 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Cd40lgP27548 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.57□□□□□ -0.72
Cd40lgP27548 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cd40lgP27548 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cd40lgP27548 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Cd40lgP27548 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Cd40lgP27548 Gm12165-201ENSMUST00000117047 342 ntBASIC10.57□□□□□ -0.72
Cd40lgP27548 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.57□□□□□ -0.72
Cd40lgP27548 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.57□□□□□ -0.72
Cd40lgP27548 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.57□□□□□ -0.72
Cd40lgP27548 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.57□□□□□ -0.72
Cd40lgP27548 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.57□□□□□ -0.72
Cd40lgP27548 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Gm5369-201ENSMUST00000217499 588 ntBASIC10.57□□□□□ -0.72
Cd40lgP27548 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Cd40lgP27548 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Cd40lgP27548 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.57□□□□□ -0.72
Cd40lgP27548 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.57□□□□□ -0.72
Cd40lgP27548 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cd40lgP27548 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.57□□□□□ -0.72
Cd40lgP27548 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Cd40lgP27548 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.57□□□□□ -0.72
Cd40lgP27548 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.57□□□□□ -0.72
Cd40lgP27548 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cd40lgP27548 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cd40lgP27548 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Cd40lgP27548 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cd40lgP27548 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC10.56□□□□□ -0.72
Cd40lgP27548 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Cd40lgP27548 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Cd40lgP27548 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.56□□□□□ -0.72
Cd40lgP27548 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.56□□□□□ -0.72
Cd40lgP27548 Map2-206ENSMUST00000114017 4981 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms