Protein–RNA interactions for Protein: P25233

Ndn, Necdin, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NdnP25233 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
NdnP25233 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.13□□□□□ -0.95
NdnP25233 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
NdnP25233 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9.13□□□□□ -0.95
NdnP25233 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
NdnP25233 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
NdnP25233 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.13□□□□□ -0.95
NdnP25233 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC9.13□□□□□ -0.95
NdnP25233 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 Tnfsf18-201ENSMUST00000086084 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
NdnP25233 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC9.12□□□□□ -0.95
NdnP25233 Kcnj5-202ENSMUST00000214223 3101 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
NdnP25233 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC9.12□□□□□ -0.95
NdnP25233 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 Gm19972-201ENSMUST00000218180 5664 ntBASIC9.12□□□□□ -0.95
NdnP25233 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 D130017N08Rik-202ENSMUST00000180951 2573 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC9.12□□□□□ -0.95
NdnP25233 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
NdnP25233 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC9.12□□□□□ -0.95
NdnP25233 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 Gm42929-201ENSMUST00000198374 1286 ntBASIC9.12□□□□□ -0.95
NdnP25233 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 Hemgn-201ENSMUST00000071096 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC9.12□□□□□ -0.95
NdnP25233 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
NdnP25233 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 R3hdm2-205ENSMUST00000105251 3739 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
NdnP25233 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
NdnP25233 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
NdnP25233 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC9.12□□□□□ -0.95
NdnP25233 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC9.12□□□□□ -0.95
NdnP25233 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
NdnP25233 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC9.11□□□□□ -0.95
NdnP25233 Gm44745-201ENSMUST00000206563 2723 ntBASIC9.11□□□□□ -0.95
NdnP25233 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
NdnP25233 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NdnP25233 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC9.11□□□□□ -0.95
NdnP25233 Slc27a6-201ENSMUST00000025500 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NdnP25233 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NdnP25233 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC9.11□□□□□ -0.95
NdnP25233 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
NdnP25233 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NdnP25233 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
NdnP25233 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
NdnP25233 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
NdnP25233 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NdnP25233 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
NdnP25233 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
NdnP25233 Trak1-211ENSMUST00000211187 4043 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
NdnP25233 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NdnP25233 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC9.11□□□□□ -0.95
NdnP25233 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
NdnP25233 Gm11814-201ENSMUST00000119515 929 ntBASIC9.11□□□□□ -0.95
NdnP25233 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
NdnP25233 Gm15806-201ENSMUST00000120696 955 ntBASIC9.11□□□□□ -0.95
NdnP25233 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
NdnP25233 Gm16296-201ENSMUST00000159905 325 ntBASIC9.11□□□□□ -0.95
NdnP25233 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC9.11□□□□□ -0.95
NdnP25233 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC9.11□□□□□ -0.95
NdnP25233 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC9.11□□□□□ -0.95
NdnP25233 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC9.11□□□□□ -0.95
NdnP25233 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
NdnP25233 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.11□□□□□ -0.95
NdnP25233 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC9.11□□□□□ -0.95
NdnP25233 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
NdnP25233 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
NdnP25233 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NdnP25233 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
NdnP25233 Gm44914-201ENSMUST00000207191 2720 ntBASIC9.11□□□□□ -0.95
NdnP25233 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NdnP25233 Gm37264-201ENSMUST00000194916 2192 ntBASIC9.11□□□□□ -0.95
NdnP25233 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
NdnP25233 Rdh9-201ENSMUST00000052652 2698 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NdnP25233 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
NdnP25233 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
NdnP25233 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NdnP25233 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NdnP25233 Sbno2-201ENSMUST00000042771 4227 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
NdnP25233 Zmat2-201ENSMUST00000001419 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
NdnP25233 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms