Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Hmgn1P18608 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Hmgn1P18608 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.4□□□□□ -0.75
Hmgn1P18608 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Hmgn1P18608 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.75
Hmgn1P18608 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.39□□□□□ -0.75
Hmgn1P18608 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Hmgn1P18608 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Hmgn1P18608 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Hmgn1P18608 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Gm13829-201ENSMUST00000119600 138 ntBASIC10.39□□□□□ -0.75
Hmgn1P18608 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.39□□□□□ -0.75
Hmgn1P18608 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Hmgn1P18608 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.39□□□□□ -0.75
Hmgn1P18608 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.39□□□□□ -0.75
Hmgn1P18608 Gm17827-201ENSMUST00000211825 742 ntBASIC10.39□□□□□ -0.75
Hmgn1P18608 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.39□□□□□ -0.75
Hmgn1P18608 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.39□□□□□ -0.75
Hmgn1P18608 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Gm4978-201ENSMUST00000071565 801 ntBASIC10.39□□□□□ -0.75
Hmgn1P18608 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Hmgn1P18608 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hmgn1P18608 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Hmgn1P18608 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hmgn1P18608 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hmgn1P18608 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.38□□□□□ -0.75
Hmgn1P18608 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hmgn1P18608 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hmgn1P18608 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hmgn1P18608 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hmgn1P18608 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hmgn1P18608 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hmgn1P18608 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hmgn1P18608 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hmgn1P18608 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hmgn1P18608 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.38□□□□□ -0.75
Hmgn1P18608 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hmgn1P18608 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hmgn1P18608 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Hmgn1P18608 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Hmgn1P18608 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.38□□□□□ -0.75
Hmgn1P18608 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hmgn1P18608 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.38□□□□□ -0.75
Hmgn1P18608 Gm22846-201ENSMUST00000157706 270 ntBASIC10.38□□□□□ -0.75
Hmgn1P18608 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.38□□□□□ -0.75
Hmgn1P18608 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.38□□□□□ -0.75
Hmgn1P18608 Gm37424-201ENSMUST00000191727 561 ntBASIC10.38□□□□□ -0.75
Hmgn1P18608 Gm9353-201ENSMUST00000200472 604 ntBASIC10.38□□□□□ -0.75
Hmgn1P18608 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hmgn1P18608 Gm44651-201ENSMUST00000207343 372 ntBASIC10.38□□□□□ -0.75
Hmgn1P18608 Gm21769-201ENSMUST00000211922 111 ntBASIC10.38□□□□□ -0.75
Hmgn1P18608 Gm18935-201ENSMUST00000212692 664 ntBASIC10.38□□□□□ -0.75
Hmgn1P18608 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.38□□□□□ -0.75
Hmgn1P18608 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hmgn1P18608 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10.38□□□□□ -0.75
Hmgn1P18608 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms