Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04213 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
P04213 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.9□□□□□ -0.66
P04213 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.9□□□□□ -0.66
P04213 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04213 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04213 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04213 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
P04213 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.9□□□□□ -0.66
P04213 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.9□□□□□ -0.66
P04213 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04213 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
P04213 Gm13809-201ENSMUST00000117921 597 ntBASIC10.9□□□□□ -0.66
P04213 Gm12997-201ENSMUST00000120207 640 ntBASIC10.9□□□□□ -0.66
P04213 Gm15549-201ENSMUST00000121595 622 ntBASIC10.9□□□□□ -0.66
P04213 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.9□□□□□ -0.66
P04213 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.9□□□□□ -0.66
P04213 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.9□□□□□ -0.66
P04213 Gm12407-201ENSMUST00000180219 324 ntBASIC10.9□□□□□ -0.66
P04213 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.9□□□□□ -0.66
P04213 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
P04213 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.9□□□□□ -0.66
P04213 Gm45856-201ENSMUST00000212752 416 ntBASIC10.9□□□□□ -0.66
P04213 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.9□□□□□ -0.66
P04213 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.9□□□□□ -0.66
P04213 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04213 Ntng1-201ENSMUST00000051253 327 ntBASIC10.9□□□□□ -0.66
P04213 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04213 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04213 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
P04213 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
P04213 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
P04213 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.9□□□□□ -0.66
P04213 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
P04213 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
P04213 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
P04213 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04213 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
P04213 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
P04213 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
P04213 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
P04213 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
P04213 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.89□□□□□ -0.67
P04213 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Gm6506-201ENSMUST00000119775 1136 ntBASIC10.89□□□□□ -0.67
P04213 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.89□□□□□ -0.67
P04213 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.89□□□□□ -0.67
P04213 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
P04213 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.89□□□□□ -0.67
P04213 Gm29499-201ENSMUST00000189151 486 ntBASIC10.89□□□□□ -0.67
P04213 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Gm28329-201ENSMUST00000191208 689 ntBASIC10.89□□□□□ -0.67
P04213 Gm29171-201ENSMUST00000191397 486 ntBASIC10.89□□□□□ -0.67
P04213 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.89□□□□□ -0.67
P04213 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.89□□□□□ -0.67
P04213 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.89□□□□□ -0.67
P04213 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.89□□□□□ -0.67
P04213 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
P04213 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
P04213 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.89□□□□□ -0.67
P04213 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.89□□□□□ -0.67
P04213 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.89□□□□□ -0.67
P04213 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.89□□□□□ -0.67
P04213 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
P04213 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.89□□□□□ -0.67
P04213 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.89□□□□□ -0.67
P04213 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04213 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04213 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04213 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04213 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04213 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04213 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.88□□□□□ -0.67
P04213 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04213 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms