Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
H3f3cP02301 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
H3f3cP02301 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3cP02301 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3cP02301 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3cP02301 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3cP02301 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3cP02301 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3cP02301 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3cP02301 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3cP02301 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC9.82□□□□□ -0.84
H3f3cP02301 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3cP02301 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3cP02301 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3cP02301 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3cP02301 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC9.82□□□□□ -0.84
H3f3cP02301 AC159195.3-201ENSMUST00000225162 2211 ntBASIC9.82□□□□□ -0.84
H3f3cP02301 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3cP02301 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3cP02301 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.82□□□□□ -0.84
H3f3cP02301 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
H3f3cP02301 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3cP02301 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
H3f3cP02301 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
H3f3cP02301 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC9.81□□□□□ -0.84
H3f3cP02301 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
H3f3cP02301 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.81□□□□□ -0.84
H3f3cP02301 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Gm6903-201ENSMUST00000160509 1366 ntBASIC9.81□□□□□ -0.84
H3f3cP02301 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.81□□□□□ -0.84
H3f3cP02301 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
H3f3cP02301 Gm12165-201ENSMUST00000117047 342 ntBASIC9.81□□□□□ -0.84
H3f3cP02301 Gm15566-201ENSMUST00000121130 590 ntBASIC9.81□□□□□ -0.84
H3f3cP02301 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC9.81□□□□□ -0.84
H3f3cP02301 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC9.81□□□□□ -0.84
H3f3cP02301 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC9.81□□□□□ -0.84
H3f3cP02301 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC9.81□□□□□ -0.84
H3f3cP02301 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
H3f3cP02301 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC9.81□□□□□ -0.84
H3f3cP02301 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Gm10774-201ENSMUST00000188689 204 ntBASIC9.81□□□□□ -0.84
H3f3cP02301 Gm37246-201ENSMUST00000192665 835 ntBASIC9.81□□□□□ -0.84
H3f3cP02301 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
H3f3cP02301 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC9.81□□□□□ -0.84
H3f3cP02301 AC122408.1-201ENSMUST00000218949 218 ntBASIC9.81□□□□□ -0.84
H3f3cP02301 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC9.81□□□□□ -0.84
H3f3cP02301 Spcs1-203ENSMUST00000226374 592 ntBASIC9.81□□□□□ -0.84
H3f3cP02301 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Ginm1-202ENSMUST00000065124 300 ntBASIC9.81□□□□□ -0.84
H3f3cP02301 Gm4978-201ENSMUST00000071565 801 ntBASIC9.81□□□□□ -0.84
H3f3cP02301 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.81□□□□□ -0.84
H3f3cP02301 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.81□□□□□ -0.84
H3f3cP02301 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
H3f3cP02301 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC9.81□□□□□ -0.84
H3f3cP02301 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC9.81□□□□□ -0.84
H3f3cP02301 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.81□□□□□ -0.84
H3f3cP02301 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.81□□□□□ -0.84
H3f3cP02301 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
H3f3cP02301 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
H3f3cP02301 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3cP02301 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
H3f3cP02301 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3cP02301 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3cP02301 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3cP02301 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3cP02301 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
H3f3cP02301 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3cP02301 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3cP02301 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3cP02301 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3cP02301 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC9.8□□□□□ -0.84
H3f3cP02301 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
H3f3cP02301 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.8□□□□□ -0.84
H3f3cP02301 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
H3f3cP02301 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms