Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
P01852 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.45□□□□□ -0.74
P01852 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.45□□□□□ -0.74
P01852 AC107453.4-201ENSMUST00000227068 1817 ntBASIC10.45□□□□□ -0.74
P01852 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.45□□□□□ -0.74
P01852 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.45□□□□□ -0.74
P01852 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
P01852 Gm12616-201ENSMUST00000118594 382 ntBASIC10.45□□□□□ -0.74
P01852 Gm15573-201ENSMUST00000119487 540 ntBASIC10.45□□□□□ -0.74
P01852 Gm11956-201ENSMUST00000119525 512 ntBASIC10.45□□□□□ -0.74
P01852 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC10.45□□□□□ -0.74
P01852 Gm4726-201ENSMUST00000135604 736 ntBASIC10.45□□□□□ -0.74
P01852 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.45□□□□□ -0.74
P01852 Gm6019-201ENSMUST00000148369 736 ntBASIC10.45□□□□□ -0.74
P01852 Gm9550-201ENSMUST00000161130 862 ntBASIC10.45□□□□□ -0.74
P01852 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 Gm12624-201ENSMUST00000177615 382 ntBASIC10.45□□□□□ -0.74
P01852 Gm12621-201ENSMUST00000177760 382 ntBASIC10.45□□□□□ -0.74
P01852 Gm12615-201ENSMUST00000177970 382 ntBASIC10.45□□□□□ -0.74
P01852 Gm12622-201ENSMUST00000177975 382 ntBASIC10.45□□□□□ -0.74
P01852 Gm12627-201ENSMUST00000178412 382 ntBASIC10.45□□□□□ -0.74
P01852 Gm12625-201ENSMUST00000179122 382 ntBASIC10.45□□□□□ -0.74
P01852 Gm12614-201ENSMUST00000179586 382 ntBASIC10.45□□□□□ -0.74
P01852 Gm12613-201ENSMUST00000180323 382 ntBASIC10.45□□□□□ -0.74
P01852 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.45□□□□□ -0.74
P01852 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.45□□□□□ -0.74
P01852 Gm43916-201ENSMUST00000205062 967 ntBASIC10.45□□□□□ -0.74
P01852 Gm2517-201ENSMUST00000215651 348 ntBASIC10.45□□□□□ -0.74
P01852 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.45□□□□□ -0.74
P01852 AC125486.1-201ENSMUST00000218701 320 ntBASIC10.45□□□□□ -0.74
P01852 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.45□□□□□ -0.74
P01852 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
P01852 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
P01852 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
P01852 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
P01852 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.45□□□□□ -0.74
P01852 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.45□□□□□ -0.74
P01852 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
P01852 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.45□□□□□ -0.74
P01852 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
P01852 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
P01852 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
P01852 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
P01852 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
P01852 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC10.44□□□□□ -0.74
P01852 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC10.44□□□□□ -0.74
P01852 Gm14263-201ENSMUST00000117955 746 ntBASIC10.44□□□□□ -0.74
P01852 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Mir1943-201ENSMUST00000158276 73 ntBASIC10.44□□□□□ -0.74
P01852 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC10.44□□□□□ -0.74
P01852 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC10.44□□□□□ -0.74
P01852 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
P01852 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.44□□□□□ -0.74
P01852 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC10.44□□□□□ -0.74
P01852 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.44□□□□□ -0.74
P01852 Gm10702-201ENSMUST00000098929 1268 ntBASIC10.44□□□□□ -0.74
P01852 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.44□□□□□ -0.74
P01852 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P01852 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms