Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
TcraP01849 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC8.31□□□□□ -1.08
TcraP01849 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
TcraP01849 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Xpo7-201ENSMUST00000022696 4472 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
TcraP01849 Gm38192-201ENSMUST00000194364 1847 ntBASIC8.31□□□□□ -1.08
TcraP01849 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC8.31□□□□□ -1.08
TcraP01849 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
TcraP01849 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TcraP01849 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
TcraP01849 AC123857.2-201ENSMUST00000225756 1582 ntBASIC8.31□□□□□ -1.08
TcraP01849 AC154671.1-201ENSMUST00000228617 1578 ntBASIC8.31□□□□□ -1.08
TcraP01849 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
TcraP01849 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC8.3□□□□□ -1.08
TcraP01849 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Gm43579-201ENSMUST00000202387 1307 ntBASIC8.3□□□□□ -1.08
TcraP01849 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
TcraP01849 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC8.3□□□□□ -1.08
TcraP01849 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Scml4-201ENSMUST00000063063 4885 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Duxbl1-201ENSMUST00000049793 2266 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
TcraP01849 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Gm27731-201ENSMUST00000185192 107 ntBASIC8.3□□□□□ -1.08
TcraP01849 Gm6439-201ENSMUST00000199849 862 ntBASIC8.3□□□□□ -1.08
TcraP01849 Gm6266-201ENSMUST00000203844 806 ntBASIC8.3□□□□□ -1.08
TcraP01849 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC8.3□□□□□ -1.08
TcraP01849 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC8.3□□□□□ -1.08
TcraP01849 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC8.3□□□□□ -1.08
TcraP01849 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC8.3□□□□□ -1.08
TcraP01849 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
TcraP01849 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
TcraP01849 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
TcraP01849 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
TcraP01849 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Atp2b2-202ENSMUST00000101044 4586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC8.3□□□□□ -1.08
TcraP01849 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
TcraP01849 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
TcraP01849 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
TcraP01849 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Gm45161-201ENSMUST00000207316 2263 ntBASIC8.29□□□□□ -1.08
TcraP01849 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
TcraP01849 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC8.29□□□□□ -1.08
TcraP01849 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
TcraP01849 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC8.29□□□□□ -1.08
TcraP01849 Gm19178-201ENSMUST00000217524 1819 ntBASIC8.29□□□□□ -1.08
TcraP01849 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC8.29□□□□□ -1.08
TcraP01849 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
TcraP01849 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 CT868720.1-201ENSMUST00000223069 2544 ntBASIC8.29□□□□□ -1.08
TcraP01849 Cd300lg-202ENSMUST00000107163 2605 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TcraP01849 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms