Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.94□□□□□ -0.66
Hcn1O88704 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Hcn1O88704 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Hcn1O88704 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.94□□□□□ -0.66
Hcn1O88704 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.94□□□□□ -0.66
Hcn1O88704 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Hcn1O88704 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Hcn1O88704 Gm11663-201ENSMUST00000117888 290 ntBASIC10.94□□□□□ -0.66
Hcn1O88704 Gm11941-201ENSMUST00000119904 610 ntBASIC10.94□□□□□ -0.66
Hcn1O88704 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Gm23085-201ENSMUST00000157849 293 ntBASIC10.94□□□□□ -0.66
Hcn1O88704 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Hcn1O88704 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Hcn1O88704 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.94□□□□□ -0.66
Hcn1O88704 Gm9136-201ENSMUST00000193368 454 ntBASIC10.94□□□□□ -0.66
Hcn1O88704 Gm18753-201ENSMUST00000201000 566 ntBASIC10.94□□□□□ -0.66
Hcn1O88704 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.94□□□□□ -0.66
Hcn1O88704 Gm2553-201ENSMUST00000215986 605 ntBASIC10.94□□□□□ -0.66
Hcn1O88704 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.94□□□□□ -0.66
Hcn1O88704 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.94□□□□□ -0.66
Hcn1O88704 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Hcn1O88704 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Hcn1O88704 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Hcn1O88704 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.93□□□□□ -0.66
Hcn1O88704 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.93□□□□□ -0.66
Hcn1O88704 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Hcn1O88704 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Gm7851-201ENSMUST00000117574 323 ntBASIC10.93□□□□□ -0.66
Hcn1O88704 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.93□□□□□ -0.66
Hcn1O88704 Gm5733-201ENSMUST00000190232 939 ntBASIC10.93□□□□□ -0.66
Hcn1O88704 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.93□□□□□ -0.66
Hcn1O88704 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.93□□□□□ -0.66
Hcn1O88704 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Gm10288-201ENSMUST00000084614 537 ntBASIC10.93□□□□□ -0.66
Hcn1O88704 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Hcn1O88704 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Hcn1O88704 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.93□□□□□ -0.66
Hcn1O88704 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.93□□□□□ -0.66
Hcn1O88704 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Hcn1O88704 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.93□□□□□ -0.66
Hcn1O88704 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Hcn1O88704 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Hcn1O88704 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Hcn1O88704 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Hcn1O88704 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Hcn1O88704 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hcn1O88704 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms