Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.48□□□□□ -0.57
Chrna4O70174 Gm9089-201ENSMUST00000122027 526 ntBASIC11.48□□□□□ -0.57
Chrna4O70174 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chrna4O70174 Gm4726-201ENSMUST00000135604 736 ntBASIC11.48□□□□□ -0.57
Chrna4O70174 Gm6019-201ENSMUST00000148369 736 ntBASIC11.48□□□□□ -0.57
Chrna4O70174 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.48□□□□□ -0.57
Chrna4O70174 Mir6546-201ENSMUST00000184460 62 ntBASIC11.48□□□□□ -0.57
Chrna4O70174 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
Chrna4O70174 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.48□□□□□ -0.57
Chrna4O70174 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.48□□□□□ -0.57
Chrna4O70174 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.48□□□□□ -0.57
Chrna4O70174 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.48□□□□□ -0.57
Chrna4O70174 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.48□□□□□ -0.57
Chrna4O70174 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chrna4O70174 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Chrna4O70174 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.48□□□□□ -0.57
Chrna4O70174 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chrna4O70174 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.48□□□□□ -0.57
Chrna4O70174 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chrna4O70174 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chrna4O70174 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chrna4O70174 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chrna4O70174 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chrna4O70174 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chrna4O70174 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chrna4O70174 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chrna4O70174 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chrna4O70174 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Chrna4O70174 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Chrna4O70174 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.47□□□□□ -0.57
Chrna4O70174 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Chrna4O70174 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chrna4O70174 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chrna4O70174 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chrna4O70174 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chrna4O70174 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Chrna4O70174 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.47□□□□□ -0.57
Chrna4O70174 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Chrna4O70174 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chrna4O70174 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chrna4O70174 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Chrna4O70174 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.47□□□□□ -0.57
Chrna4O70174 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Chrna4O70174 Gm8111-201ENSMUST00000117659 987 ntBASIC11.47□□□□□ -0.57
Chrna4O70174 Gm16166-201ENSMUST00000118291 787 ntBASIC11.47□□□□□ -0.57
Chrna4O70174 Gm15432-201ENSMUST00000121106 195 ntBASIC11.47□□□□□ -0.57
Chrna4O70174 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.47□□□□□ -0.57
Chrna4O70174 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chrna4O70174 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chrna4O70174 Gm4654-201ENSMUST00000183305 982 ntBASIC11.47□□□□□ -0.57
Chrna4O70174 Mir6979-201ENSMUST00000183927 56 ntBASIC11.47□□□□□ -0.57
Chrna4O70174 Mir8115-201ENSMUST00000184992 119 ntBASIC11.47□□□□□ -0.57
Chrna4O70174 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chrna4O70174 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.47□□□□□ -0.57
Chrna4O70174 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chrna4O70174 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.47□□□□□ -0.57
Chrna4O70174 Gm37981-201ENSMUST00000194280 535 ntBASIC11.47□□□□□ -0.57
Chrna4O70174 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chrna4O70174 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.47□□□□□ -0.57
Chrna4O70174 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.47□□□□□ -0.57
Chrna4O70174 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chrna4O70174 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chrna4O70174 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Chrna4O70174 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chrna4O70174 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chrna4O70174 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chrna4O70174 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chrna4O70174 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chrna4O70174 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Chrna4O70174 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Chrna4O70174 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Chrna4O70174 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.46□□□□□ -0.57
Chrna4O70174 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Chrna4O70174 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Chrna4O70174 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chrna4O70174 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.46□□□□□ -0.57
Chrna4O70174 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chrna4O70174 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.46□□□□□ -0.57
Chrna4O70174 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.46□□□□□ -0.57
Chrna4O70174 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chrna4O70174 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Chrna4O70174 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chrna4O70174 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chrna4O70174 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chrna4O70174 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chrna4O70174 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chrna4O70174 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Chrna4O70174 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Chrna4O70174 Gm12463-201ENSMUST00000118271 849 ntBASIC11.46□□□□□ -0.57
Chrna4O70174 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.46□□□□□ -0.57
Chrna4O70174 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.46□□□□□ -0.57
Chrna4O70174 Gm16570-201ENSMUST00000161951 436 ntBASIC11.46□□□□□ -0.57
Chrna4O70174 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.46□□□□□ -0.57
Chrna4O70174 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chrna4O70174 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chrna4O70174 Gm43852-201ENSMUST00000202098 917 ntBASIC11.46□□□□□ -0.57
Chrna4O70174 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.46□□□□□ -0.57
Chrna4O70174 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.46□□□□□ -0.57
Chrna4O70174 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.46□□□□□ -0.57
Chrna4O70174 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms