Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
Polr1aO35134 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Polr1aO35134 Gm5335-201ENSMUST00000182995 1000 ntBASIC17.25■□□□□ 0.35
Polr1aO35134 Gm44420-201ENSMUST00000203669 490 ntBASIC17.25■□□□□ 0.35
Polr1aO35134 AC121567.1-201ENSMUST00000227213 842 ntBASIC17.25■□□□□ 0.35
Polr1aO35134 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Polr1aO35134 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Polr1aO35134 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Polr1aO35134 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC17.25■□□□□ 0.35
Polr1aO35134 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Polr1aO35134 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Polr1aO35134 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Polr1aO35134 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Polr1aO35134 Gm43364-201ENSMUST00000196046 3274 ntBASIC17.25■□□□□ 0.35
Polr1aO35134 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Polr1aO35134 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Polr1aO35134 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Polr1aO35134 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Polr1aO35134 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Polr1aO35134 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Polr1aO35134 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Polr1aO35134 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Polr1aO35134 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Polr1aO35134 Gm5254-201ENSMUST00000188353 977 ntBASIC17.24■□□□□ 0.35
Polr1aO35134 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC17.24■□□□□ 0.35
Polr1aO35134 Gm37688-201ENSMUST00000195195 465 ntBASIC17.24■□□□□ 0.35
Polr1aO35134 AC122273.1-201ENSMUST00000213634 2327 ntBASIC17.24■□□□□ 0.35
Polr1aO35134 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Polr1aO35134 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Polr1aO35134 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Polr1aO35134 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Polr1aO35134 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Polr1aO35134 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Polr1aO35134 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Polr1aO35134 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Polr1aO35134 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Polr1aO35134 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Polr1aO35134 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Polr1aO35134 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Polr1aO35134 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Polr1aO35134 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Polr1aO35134 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Polr1aO35134 Gm23604-201ENSMUST00000104311 132 ntBASIC17.24■□□□□ 0.35
Polr1aO35134 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC17.24■□□□□ 0.35
Polr1aO35134 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Polr1aO35134 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC17.24■□□□□ 0.35
Polr1aO35134 Gm28671-201ENSMUST00000187036 692 ntBASIC17.24■□□□□ 0.35
Polr1aO35134 Gm2345-201ENSMUST00000193451 589 ntBASIC17.24■□□□□ 0.35
Polr1aO35134 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC17.24■□□□□ 0.35
Polr1aO35134 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Polr1aO35134 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Polr1aO35134 AC154213.1-201ENSMUST00000228234 583 ntBASIC17.24■□□□□ 0.35
Polr1aO35134 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Polr1aO35134 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Polr1aO35134 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Polr1aO35134 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC17.23■□□□□ 0.35
Polr1aO35134 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Polr1aO35134 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Polr1aO35134 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Polr1aO35134 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Polr1aO35134 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Polr1aO35134 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Polr1aO35134 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Polr1aO35134 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC17.23■□□□□ 0.35
Polr1aO35134 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Polr1aO35134 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Polr1aO35134 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Polr1aO35134 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC17.23■□□□□ 0.35
Polr1aO35134 Gm6238-201ENSMUST00000120999 465 ntBASIC17.23■□□□□ 0.35
Polr1aO35134 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Polr1aO35134 Gm16441-201ENSMUST00000138176 924 ntBASIC17.23■□□□□ 0.35
Polr1aO35134 Gm6038-201ENSMUST00000154310 948 ntBASIC17.23■□□□□ 0.35
Polr1aO35134 Gm27826-201ENSMUST00000175282 255 ntBASIC17.23■□□□□ 0.35
Polr1aO35134 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC17.23■□□□□ 0.35
Polr1aO35134 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC17.23■□□□□ 0.35
Polr1aO35134 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Polr1aO35134 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Polr1aO35134 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Polr1aO35134 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Polr1aO35134 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Polr1aO35134 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Polr1aO35134 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Polr1aO35134 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Polr1aO35134 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Polr1aO35134 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC17.22■□□□□ 0.35
Polr1aO35134 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Polr1aO35134 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Polr1aO35134 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Polr1aO35134 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Polr1aO35134 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Polr1aO35134 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Polr1aO35134 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Polr1aO35134 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Polr1aO35134 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC17.22■□□□□ 0.35
Polr1aO35134 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC17.22■□□□□ 0.35
Polr1aO35134 CT010486.3-201ENSMUST00000224555 811 ntBASIC17.22■□□□□ 0.35
Polr1aO35134 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Polr1aO35134 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Polr1aO35134 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Polr1aO35134 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms