Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.72□□□□□ -0.53
Atf6F6VAN0 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Gm15236-201ENSMUST00000117309 379 ntBASIC11.72□□□□□ -0.53
Atf6F6VAN0 Gm13809-201ENSMUST00000117921 597 ntBASIC11.72□□□□□ -0.53
Atf6F6VAN0 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Gm5363-201ENSMUST00000211927 938 ntBASIC11.72□□□□□ -0.53
Atf6F6VAN0 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.72□□□□□ -0.53
Atf6F6VAN0 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.72□□□□□ -0.53
Atf6F6VAN0 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.72□□□□□ -0.53
Atf6F6VAN0 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.72□□□□□ -0.53
Atf6F6VAN0 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Atf6F6VAN0 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atf6F6VAN0 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.71□□□□□ -0.53
Atf6F6VAN0 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Atf6F6VAN0 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.71□□□□□ -0.53
Atf6F6VAN0 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atf6F6VAN0 Btrc-209ENSMUST00000224478 2194 ntBASIC11.71□□□□□ -0.53
Atf6F6VAN0 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atf6F6VAN0 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atf6F6VAN0 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.71□□□□□ -0.53
Atf6F6VAN0 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atf6F6VAN0 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atf6F6VAN0 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atf6F6VAN0 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atf6F6VAN0 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atf6F6VAN0 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Atf6F6VAN0 Gm12247-201ENSMUST00000117585 670 ntBASIC11.71□□□□□ -0.53
Atf6F6VAN0 Gm11941-201ENSMUST00000119904 610 ntBASIC11.71□□□□□ -0.53
Atf6F6VAN0 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.71□□□□□ -0.53
Atf6F6VAN0 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.71□□□□□ -0.53
Atf6F6VAN0 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.71□□□□□ -0.53
Atf6F6VAN0 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atf6F6VAN0 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atf6F6VAN0 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atf6F6VAN0 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atf6F6VAN0 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.71□□□□□ -0.53
Atf6F6VAN0 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.71□□□□□ -0.53
Atf6F6VAN0 Gm12407-201ENSMUST00000180219 324 ntBASIC11.71□□□□□ -0.53
Atf6F6VAN0 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.71□□□□□ -0.53
Atf6F6VAN0 Gm6905-201ENSMUST00000205729 511 ntBASIC11.71□□□□□ -0.53
Atf6F6VAN0 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atf6F6VAN0 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.71□□□□□ -0.53
Atf6F6VAN0 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atf6F6VAN0 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Atf6F6VAN0 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Atf6F6VAN0 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Atf6F6VAN0 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Atf6F6VAN0 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Atf6F6VAN0 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Atf6F6VAN0 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Atf6F6VAN0 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Atf6F6VAN0 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Atf6F6VAN0 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Atf6F6VAN0 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Atf6F6VAN0 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Atf6F6VAN0 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Atf6F6VAN0 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Atf6F6VAN0 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Atf6F6VAN0 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Atf6F6VAN0 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Atf6F6VAN0 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Atf6F6VAN0 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atf6F6VAN0 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atf6F6VAN0 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.7□□□□□ -0.54
Atf6F6VAN0 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Atf6F6VAN0 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.7□□□□□ -0.54
Atf6F6VAN0 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atf6F6VAN0 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atf6F6VAN0 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.7□□□□□ -0.54
Atf6F6VAN0 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atf6F6VAN0 Gm9519-201ENSMUST00000206108 1337 ntBASIC11.7□□□□□ -0.54
Atf6F6VAN0 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Atf6F6VAN0 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Atf6F6VAN0 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.7□□□□□ -0.54
Atf6F6VAN0 Gm23251-201ENSMUST00000103773 110 ntBASIC11.7□□□□□ -0.54
Atf6F6VAN0 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Atf6F6VAN0 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms