Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm14165-201ENSMUST00000121456 952 ntBASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.6□□□□□ -0.39
Scn3aA2ASI5 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Scn3aA2ASI5 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Gm23612-201ENSMUST00000103823 110 ntBASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Gm11354-201ENSMUST00000121974 422 ntBASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Gm25569-201ENSMUST00000157175 131 ntBASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Gm5529-201ENSMUST00000165691 891 ntBASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Gm23576-201ENSMUST00000179918 110 ntBASIC12.59□□□□□ -0.39
Scn3aA2ASI5 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Gm9162-201ENSMUST00000182081 991 ntBASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Gm17889-201ENSMUST00000198410 598 ntBASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Gm44605-201ENSMUST00000206892 949 ntBASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Gm18204-201ENSMUST00000209835 793 ntBASIC12.59□□□□□ -0.39
Scn3aA2ASI5 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Scn3aA2ASI5 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Scn3aA2ASI5 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Scn3aA2ASI5 Gm6158-201ENSMUST00000109467 904 ntBASIC12.58□□□□□ -0.39
Scn3aA2ASI5 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC12.58□□□□□ -0.39
Scn3aA2ASI5 Gm7541-201ENSMUST00000118361 535 ntBASIC12.58□□□□□ -0.39
Scn3aA2ASI5 Gm4917-201ENSMUST00000121452 650 ntBASIC12.58□□□□□ -0.39
Scn3aA2ASI5 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Scn3aA2ASI5 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Scn3aA2ASI5 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Scn3aA2ASI5 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.58□□□□□ -0.39
Scn3aA2ASI5 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Scn3aA2ASI5 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Scn3aA2ASI5 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Scn3aA2ASI5 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Scn3aA2ASI5 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Scn3aA2ASI5 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Scn3aA2ASI5 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Scn3aA2ASI5 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Scn3aA2ASI5 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Scn3aA2ASI5 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms