Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Mir7051-201ENSMUST00000184167 73 ntBASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Gm37986-201ENSMUST00000193285 383 ntBASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Gm37826-201ENSMUST00000195329 322 ntBASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Gm9645-201ENSMUST00000197131 792 ntBASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Gm18974-201ENSMUST00000221478 1031 ntBASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Gm10702-201ENSMUST00000098929 1268 ntBASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk3aQ9JKX8 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 AC125486.1-201ENSMUST00000218701 320 ntBASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Gm6430-201ENSMUST00000054664 1248 ntBASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Upk3aQ9JKX8 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Upk3aQ9JKX8 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Upk3aQ9JKX8 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Upk3aQ9JKX8 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.96□□□□□ -0.66
Upk3aQ9JKX8 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Upk3aQ9JKX8 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.66
Upk3aQ9JKX8 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Upk3aQ9JKX8 Gm9244-201ENSMUST00000056767 2129 ntBASIC10.96□□□□□ -0.66
Upk3aQ9JKX8 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Upk3aQ9JKX8 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Upk3aQ9JKX8 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.96□□□□□ -0.66
Upk3aQ9JKX8 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Upk3aQ9JKX8 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Upk3aQ9JKX8 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Upk3aQ9JKX8 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms