Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cpne8Q9DC53 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 BC043934-202ENSMUST00000185694 2356 ntBASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Gm12463-201ENSMUST00000118271 849 ntBASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Gm15617-201ENSMUST00000118973 771 ntBASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.86□□□□□ -0.51
Cpne8Q9DC53 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.86□□□□□ -0.51
Cpne8Q9DC53 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Gm5996-201ENSMUST00000211110 718 ntBASIC11.86□□□□□ -0.51
Cpne8Q9DC53 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Gm9257-201ENSMUST00000221254 232 ntBASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.86□□□□□ -0.51
Cpne8Q9DC53 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Snord17-201ENSMUST00000104526 238 ntBASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Gm12266-201ENSMUST00000120311 962 ntBASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cpne8Q9DC53 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms