Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Chmp2aQ9DB34 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Gm15352-201ENSMUST00000118696 270 ntBASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Gm11836-201ENSMUST00000121022 441 ntBASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Gm4654-201ENSMUST00000183305 982 ntBASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Gm43186-201ENSMUST00000198130 824 ntBASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Gm43002-201ENSMUST00000200310 155 ntBASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Gm9132-201ENSMUST00000210182 832 ntBASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Gm5996-201ENSMUST00000211110 718 ntBASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Gm2517-201ENSMUST00000215651 348 ntBASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp2aQ9DB34 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.9□□□□□ -0.51
Chmp2aQ9DB34 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Chmp2aQ9DB34 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
Chmp2aQ9DB34 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.9□□□□□ -0.51
Chmp2aQ9DB34 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Chmp2aQ9DB34 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Chmp2aQ9DB34 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Gm22902-201ENSMUST00000158488 302 ntBASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Gm10807-201ENSMUST00000177134 795 ntBASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Gm43947-201ENSMUST00000203019 959 ntBASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Gm8574-201ENSMUST00000203207 924 ntBASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Gm43916-201ENSMUST00000205062 967 ntBASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp2aQ9DB34 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp2aQ9DB34 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms