Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sf3a3Q9D554 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Gm7561-201ENSMUST00000211203 886 ntBASIC11.48□□□□□ -0.57
Sf3a3Q9D554 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sf3a3Q9D554 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Nln-205ENSMUST00000224945 2486 ntBASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Gm12058-201ENSMUST00000118614 437 ntBASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Gm24845-201ENSMUST00000158034 109 ntBASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sf3a3Q9D554 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms