Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Gm13809-201ENSMUST00000117921 597 ntBASIC12.55□□□□□ -0.4
Cfap53Q9D439 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.55□□□□□ -0.4
Cfap53Q9D439 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Gm10254-201ENSMUST00000052888 867 ntBASIC12.55□□□□□ -0.4
Cfap53Q9D439 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap53Q9D439 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cfap53Q9D439 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.54□□□□□ -0.4
Cfap53Q9D439 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.54□□□□□ -0.4
Cfap53Q9D439 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.54□□□□□ -0.4
Cfap53Q9D439 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.54□□□□□ -0.4
Cfap53Q9D439 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.54□□□□□ -0.4
Cfap53Q9D439 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Gm44008-201ENSMUST00000204345 412 ntBASIC12.54□□□□□ -0.4
Cfap53Q9D439 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Gm1821-202ENSMUST00000227415 750 ntBASIC12.54□□□□□ -0.4
Cfap53Q9D439 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Cfap53Q9D439 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.54□□□□□ -0.4
Cfap53Q9D439 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.54□□□□□ -0.4
Cfap53Q9D439 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cfap53Q9D439 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cfap53Q9D439 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.53□□□□□ -0.4
Cfap53Q9D439 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.53□□□□□ -0.4
Cfap53Q9D439 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Gm3150-201ENSMUST00000166418 204 ntBASIC12.53□□□□□ -0.4
Cfap53Q9D439 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.53□□□□□ -0.4
Cfap53Q9D439 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.53□□□□□ -0.4
Cfap53Q9D439 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cfap53Q9D439 Gm7848-201ENSMUST00000210739 718 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms