Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Gm14071-201ENSMUST00000117817 509 ntBASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Stard4-202ENSMUST00000118990 648 ntTSL 2 BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 1700030A11Rik-201ENSMUST00000125317 888 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Wdr17-204ENSMUST00000129132 1043 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Gm6038-201ENSMUST00000154310 948 ntBASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Gm28746-201ENSMUST00000187453 380 ntBASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Gm38038-201ENSMUST00000193803 259 ntBASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Gm44716-201ENSMUST00000209007 710 ntBASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 AC102327.1-201ENSMUST00000226389 742 ntBASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Gm24146-201ENSMUST00000082760 321 ntBASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Gm46339-201ENSMUST00000222720 3539 ntBASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lysmd1Q9D0E3 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Mir675-201ENSMUST00000102320 84 ntBASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Gm12397-201ENSMUST00000117674 615 ntBASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Dnmt3l-ps1-201ENSMUST00000118734 1253 ntBASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Tnni1-208ENSMUST00000154463 749 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Snord55-201ENSMUST00000174939 79 ntBASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Gm42875-201ENSMUST00000197674 1015 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Pla2g2a-201ENSMUST00000077582 784 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Gm16410-201ENSMUST00000094550 774 ntBASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Gm10617-201ENSMUST00000098368 1172 ntBASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lysmd1Q9D0E3 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms