Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Gm10020-201ENSMUST00000081993 612 ntBASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 AC137950.2-202ENSMUST00000227150 1635 ntBASIC11.68□□□□□ -0.54
Cldnd1Q9CQX5 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Gm3828-201ENSMUST00000121817 257 ntBASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Gm7765-201ENSMUST00000182585 974 ntBASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Gm2345-201ENSMUST00000193451 589 ntBASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Gm37207-201ENSMUST00000194284 296 ntBASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Gm38314-201ENSMUST00000195709 625 ntBASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Gm44124-201ENSMUST00000204159 472 ntBASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Gm44008-201ENSMUST00000204345 412 ntBASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 AC164087.2-201ENSMUST00000216206 1072 ntBASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 AC121567.1-201ENSMUST00000227213 842 ntBASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldnd1Q9CQX5 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 AC159810.1-201ENSMUST00000214838 1480 ntBASIC11.66□□□□□ -0.54
Cldnd1Q9CQX5 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 121.6 ms