Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ska1Q9CPV1 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ska1Q9CPV1 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska1Q9CPV1 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska1Q9CPV1 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ska1Q9CPV1 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska1Q9CPV1 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ska1Q9CPV1 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska1Q9CPV1 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ska1Q9CPV1 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.82□□□□□ -0.68
Ska1Q9CPV1 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ska1Q9CPV1 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Gm15276-201ENSMUST00000145953 498 ntBASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.81□□□□□ -0.68
Ska1Q9CPV1 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Gm28581-201ENSMUST00000186086 2177 ntBASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ska1Q9CPV1 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Gm20482-202ENSMUST00000174729 825 ntBASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Gm43962-201ENSMUST00000203898 190 ntBASIC10.8□□□□□ -0.68
Ska1Q9CPV1 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Gm13097-201ENSMUST00000210722 397 ntBASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ska1Q9CPV1 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ska1Q9CPV1 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ska1Q9CPV1 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.79□□□□□ -0.68
Ska1Q9CPV1 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms