Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Gm23949-201ENSMUST00000104027 127 ntBASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Gm11509-201ENSMUST00000117358 325 ntBASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Gm14017-201ENSMUST00000121934 386 ntBASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Gm23958-201ENSMUST00000157207 105 ntBASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Gm8343-201ENSMUST00000182705 994 ntBASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Mir7070-201ENSMUST00000183657 86 ntBASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Gm2260-201ENSMUST00000184965 657 ntBASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Gm18038-201ENSMUST00000197900 485 ntBASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Gm18212-201ENSMUST00000211678 889 ntBASIC11.09□□□□□ -0.63
Rnf111Q99ML9 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Gm26448-201ENSMUST00000082446 203 ntBASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rnf111Q99ML9 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.09□□□□□ -0.63
Rnf111Q99ML9 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.08□□□□□ -0.63
Rnf111Q99ML9 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
Rnf111Q99ML9 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Gm13899-201ENSMUST00000121519 1255 ntBASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Gm22119-201ENSMUST00000175594 99 ntBASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Gm18753-201ENSMUST00000201000 566 ntBASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Gm2553-201ENSMUST00000215986 605 ntBASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Gm9797-202ENSMUST00000218003 294 ntBASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Gm18730-201ENSMUST00000218038 343 ntBASIC11.08□□□□□ -0.64
Rnf111Q99ML9 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.08□□□□□ -0.64
Rnf111Q99ML9 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Mir433-201ENSMUST00000093564 124 ntBASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf111Q99ML9 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms