Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdhb3Q91XZ7 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Gm4986-201ENSMUST00000119731 549 ntBASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Gm8738-201ENSMUST00000172606 329 ntBASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Gm29436-202ENSMUST00000189054 1172 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Gm29664-201ENSMUST00000191125 463 ntBASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Gm37489-201ENSMUST00000191883 159 ntBASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Gm39307-201ENSMUST00000216780 1037 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdhb3Q91XZ7 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Gm24231-201ENSMUST00000104315 133 ntBASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Gm15370-201ENSMUST00000117158 253 ntBASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Gm15595-201ENSMUST00000120840 961 ntBASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Gm16234-201ENSMUST00000124976 815 ntTSL 5 BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdhb3Q91XZ7 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms